RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 ZNF598Q86UK7 904 aaKnown RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 CMTR2Q8IYT2 770 aaKnown RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 CPB2Q96IY4 423 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 SPATA32Q96LK8 384 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 TGS1Q96RS0 853 aaKnown RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 CDX2Q99626 313 aaPredicted RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 REEP2Q9BRK0 252 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 CNTNAP2Q9UHC6 1331 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 ZNF623O75123 536 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
TMEM253-202ENST00000553744 FGFR1P11362 822 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 ERVK-21P61565 698 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 GIT2Q14161 759 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
TMEM253-202ENST00000553744 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 RESP18Q5W5W9 173 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 SV2BQ7L1I2 683 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 PDILTQ8N807 584 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 RNF169Q8NCN4 708 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 SPIRE2Q8WWL2 714 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 ARNTL2Q8WYA1 636 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 SAMD11Q96NU1 681 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 C17orf80Q9BSJ5 609 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 PANK2Q9BZ23 570 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
TMEM253-202ENST00000553744 PRDM12Q9H4Q4 367 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 KMT5AQ9NQR1 393 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 EYSQ5T1H1 3165 aa13.1□□□□□ -0.31
TMEM253-202ENST00000553744 EPOPA6NHQ4 379 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 TBKBP1A7MCY6 615 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 ACKR2O00590 384 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 FAM13AO94988 1023 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 EDN1P05305 212 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 LIG1P18858 919 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 ZNF131P52739 623 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 E2F4Q16254 413 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 CLLU1OSQ5K130 101 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 MYLIPQ8WY64 445 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 NTPCRQ9BSD7 190 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 TMEM134Q9H6X4 195 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 PARVGQ9HBI0 331 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 FAM13BQ9NYF5 915 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 LARSQ9P2J5 1176 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 KCNG1Q9UIX4 513 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
TMEM253-202ENST00000553744 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
TMEM253-202ENST00000553744 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.31
TMEM253-202ENST00000553744 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.31
TMEM253-202ENST00000553744 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 MYMKA6NI61 221 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 K7ERI5 159 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 N4BP3O15049 544 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 SLC16A4O15374 487 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
TMEM253-202ENST00000553744 SMTNP53814 917 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 NCKAP1LP55160 1127 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 EPC2Q52LR7 807 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 SLC27A1Q6PCB7 646 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TAS1R3Q7RTX0 852 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
TMEM253-202ENST00000553744 CDR2LQ86X02 465 aaPredicted RBP13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TMEM192Q8IY95 271 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 ABI1Q8IZP0 508 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 SMG8Q8ND04 991 aaKnown RBP13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 CNNM3Q8NE01 707 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 HELQQ8TDG4 1101 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 DDX12PQ92771 950 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 LPPQ93052 612 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 DHX58Q96C10 678 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 GAS2L1Q99501 681 aaPredicted RBP13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
TMEM253-202ENST00000553744 TNMDQ9H2S6 317 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 PDZD7Q9H5P4 517 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 IPPQ9Y573 584 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 MUC3AQ02505 3323 aa13.08□□□□□ -0.32
TMEM253-202ENST00000553744 RALGAPA2Q2PPJ7 1873 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms