RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LEO1Q8WVC0 666 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 ATXN2LQ8WWM7 1075 aaKnown RBP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 GAB3Q8WWW8 586 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 TRIM8Q9BZR9 551 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 USP18Q9UMW8 372 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 REXO2Q9Y3B8 237 aaKnown RBP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 NUMBLQ9Y6R0 609 aa5.72□□□□□ -1.49
SCFD1-210ENST00000553693 WDR33Q9C0J8 1336 aaKnown RBP5.72□□□□□ -1.49
SCFD1-210ENST00000553693 KDM1AO60341 852 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 MYCLP1P12525 358 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-210ENST00000553693 RABGGTBP53611 331 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 PPARAQ07869 468 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 ELOA2Q8IYF1 753 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-210ENST00000553693 PIK3C3Q8NEB9 887 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 SLC5A5Q92911 643 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 EMC7Q9NPA0 242 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 ING3Q9NXR8 418 aa5.71□□□□□ -1.5
SCFD1-210ENST00000553693 PRSS38A1L453 326 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 KLRG2A4D1S0 409 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-210ENST00000553693 LY86O95711 162 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 MANFP55145 182 aaKnown RBP5.7□□□□□ -1.5
SCFD1-210ENST00000553693 WNT3AP56704 352 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 CD69Q07108 199 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 TOB2Q14106 344 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-210ENST00000553693 DHCR24Q15392 516 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 ATP13A4Q4VNC1 1196 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 PLEKHG4Q58EX7 1191 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 NEU4Q8WWR8 484 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-210ENST00000553693 USP7Q93009 1102 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 MNTQ99583 582 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 EPC1Q9H2F5 836 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 SLKQ9H2G2 1235 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-210ENST00000553693 MMRN2Q9H8L6 949 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 PPP2R3BQ9Y5P8 575 aa5.7□□□□□ -1.5
SCFD1-210ENST00000553693 A0A087X0B3 334 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 PTGS2P35354 604 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 PURAQ00577 322 aaKnown RBP5.69□□□□□ -1.5
SCFD1-210ENST00000553693 MEF2AQ02078 507 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-210ENST00000553693 DUSP2Q05923 314 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 DPTQ07507 201 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 MGAT5Q09328 741 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 FNDC7Q5VTL7 733 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 BROXQ5VW32 411 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 NAIF1Q69YI7 327 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-210ENST00000553693 TAS1R1Q7RTX1 841 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 RASSF3Q86WH2 238 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 OR5M3Q8NGP4 307 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 OR14C36Q8NHC7 312 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 IL17RAQ96F46 866 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 PDCD2LQ9BRP1 358 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 FDXACB1Q9BRP7 624 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-210ENST00000553693 NOC2LQ9Y3T9 749 aaKnown RBP5.69□□□□□ -1.5
SCFD1-210ENST00000553693 TBX22Q9Y458 520 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 XDHP47989 1333 aa5.69□□□□□ -1.5
SCFD1-210ENST00000553693 A0A1W2PR48 441 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 LCHNA4D1U4 455 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 HOXA3O43365 443 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-210ENST00000553693 PPFIA4O75335 1185 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 BPIP17213 487 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 INHBCP55103 352 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 FAM214AQ32MH5 1076 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 RABL3Q5HYI8 236 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 METTL24Q5JXM2 366 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 GLB1L3Q8NCI6 653 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-210ENST00000553693 PGBD4Q96DM1 585 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 PAWRQ96IZ0 340 aaKnown RBP5.68□□□□□ -1.5
SCFD1-210ENST00000553693 ANO3Q9BYT9 981 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 ENKD1Q9H0I2 346 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 MS4A5Q9H3V2 200 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 IFT22Q9H7X7 185 aa5.68□□□□□ -1.5
SCFD1-210ENST00000553693 APOBEC2Q9Y235 224 aaKnown RBP5.68□□□□□ -1.5
SCFD1-210ENST00000553693 ZEB2O60315 1214 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 ULK1O75385 1050 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 STC2O76061 302 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 GYPEP15421 78 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 GZMKP49863 264 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 SESN3P58005 492 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 SLC25A3Q00325 362 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 CCDC62Q6P9F0 684 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 FAM83AQ86UY5 434 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 SLC25A43Q8WUT9 341 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-210ENST00000553693 CLIP3Q96DZ5 547 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 TTC1Q99614 292 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 PRRX2Q99811 253 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 CPPED1Q9BRF8 314 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-210ENST00000553693 SLC2A4RGQ9NR83 387 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 PRSS50Q9UI38 385 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 HDAC5Q9UQL6 1122 aa5.67□□□□□ -1.5
SCFD1-210ENST00000553693 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-210ENST00000553693 TRIM24O15164 1050 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 PRAMEF4O60810 478 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 RECQL4O94761 1208 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 LTA4HP09960 611 aaKnown RBP5.66□□□□□ -1.5
SCFD1-210ENST00000553693 CASRP41180 1078 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 GYS2P54840 703 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 MRPL49Q13405 166 aaKnown RBP5.66□□□□□ -1.5
SCFD1-210ENST00000553693 DDX46Q7L014 1031 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms