RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ARHGEF16Q5VV41 709 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 NIPA1Q7RTP0 329 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 NLRX1Q86UT6 975 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 RASAL3Q86YV0 1011 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 RETREG2Q8NC44 543 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 RASGRP4Q8TDF6 673 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 NSUN6Q8TEA1 469 aaKnown RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CLEC4DQ8WXI8 215 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 BRI3BPQ8WY22 251 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 SHISA4Q96DD7 197 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CDHR1Q96JP9 859 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 FAM20AQ96MK3 541 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 RAD18Q9NS91 495 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 HOMER2Q9NSB8 354 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 TMEM260Q9NX78 707 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 RBPJLQ9UBG7 517 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 MORF4L1Q9UBU8 362 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 DDX25Q9UHL0 483 aaKnown RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 USP25Q9UHP3 1055 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 ZNF214Q9UL59 606 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 PCDHA12Q9UN75 941 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 IVNS1ABPQ9Y6Y0 642 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 LOC285556D6RIA3 1793 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 PARP14Q460N5 1801 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 ZNFX1Q9P2E3 1918 aaKnown RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 COL11A1P12107 1806 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 A0A1W2PP55 124 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ASB14A6NK59 587 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 KINO60870 393 aaKnown RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 OR52Z1P0C646 297 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ADH5P11766 374 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ERCC3P19447 782 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 HOXA13P31271 388 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MAP2K2P36507 400 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 UBA7P41226 1012 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 RPS6P62753 249 aaKnown RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 SETQ01105 290 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 SOX4Q06945 474 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 BAATQ14032 418 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ARHGEF6Q15052 776 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 POU4F3Q15319 338 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 STXBP2Q15833 593 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 CPSF6Q16630 551 aaKnown RBP eCLIP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 FAM110CQ1W6H9 321 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ZNF423Q2M1K9 1284 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MUM1L1Q5H9M0 696 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 EARS2Q5JPH6 523 aaKnown RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 WDR78Q5VTH9 848 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 PCNX4Q63HM2 1172 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 KCNV1Q6PIU1 500 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 PLA2G4DQ86XP0 818 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 CCNJLQ8IV13 435 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ELOA2Q8IYF1 753 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ABRAQ8N0Z2 381 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ERMNQ8TAM6 284 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 SYTL5Q8TDW5 730 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MRPS27Q92552 414 aaKnown RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 TBC1D5Q92609 795 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 CALML4Q96GE6 196 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 DMRTB1Q96MA1 342 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 TIGD1Q96MW7 591 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 TAAR1Q96RJ0 339 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 RMDN3Q96TC7 470 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MMP19Q99542 508 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MXRA8Q9BRK3 442 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MOV10L1Q9BXT6 1211 aaKnown RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 LRRC27Q9C0I9 530 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 DNAJC25Q9H1X3 360 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 NPHS2Q9NP85 383 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 TBC1D22BQ9NU19 505 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 DDX19AQ9NUU7 478 aaKnown RBP5.63□□□□□ -1.51
VTI1B-202ENST00000553619 BTBD7Q9P203 1132 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 PRKAG2Q9UGJ0 569 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 TCEAL9Q9UHQ7 104 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 ACTL7BQ9Y614 415 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 MYH7BA7E2Y1 1941 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 RLFQ13129 1914 aa5.63□□□□□ -1.51
VTI1B-202ENST00000553619 VWA3AA6NCI4 1184 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 RASSF10A6NK89 507 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 FAM170BA6NMN3 283 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 NFIBO00712 420 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 CA12O43570 354 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 TLR2O60603 784 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 EIF3JO75822 258 aaKnown RBP5.62□□□□□ -1.51
VTI1B-202ENST00000553619 CNMDO75829 334 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 ZNF202O95125 648 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 CYP2C8P10632 490 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 MYCLP12524 364 aaPredicted RBP5.62□□□□□ -1.51
VTI1B-202ENST00000553619 MUTP22033 750 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 MAOBP27338 520 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 SYKP43405 635 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 GRIA4P48058 902 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 FAM160A1Q05DH4 1040 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 KIF22Q14807 665 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 PGM5Q15124 567 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 ZRSR1Q15695 479 aaKnown RBP5.62□□□□□ -1.51
VTI1B-202ENST00000553619 SPRED3Q2MJR0 410 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 GNPTABQ3T906 1256 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 CEP55Q53EZ4 464 aa5.62□□□□□ -1.51
VTI1B-202ENST00000553619 PRR16Q569H4 304 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms