RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CSGALNACT2Q8N6G5 542 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 ZNF366Q8N895 744 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 CHID1Q9BWS9 393 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 CUEDC2Q9H467 287 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 STARD7Q9NQZ5 370 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 I3L4J1 428 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 ORC4O43929 436 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 RANBP6O60518 1105 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PAK1Q13153 545 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 ESCO1Q5FWF5 840 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 C4orf22Q6V702 233 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 SPERTQ8NA61 448 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PSKH2Q96QS6 385 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 IER2Q9BTL4 223 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PRDM11Q9NQV5 511 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 KPNA4O00629 521 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PENKP01210 267 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 CYP2C9P11712 490 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 JAK1P23458 1154 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 IL1RL1Q01638 556 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 RABL6Q3YEC7 729 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 AAGABQ6PD74 315 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 G2E3Q7L622 706 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 NDUFAF2Q8N183 169 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 IRGQQ8WZA9 623 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PTPRN2Q92932 1015 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 ZNF717Q9BY31 904 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 NDFIP2Q9NV92 336 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PCDH10Q9P2E7 1040 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 B4E1Z4 1266 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 SYNCRIPO60506 623 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 CFBP00751 764 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 KRT6AP02538 564 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 KRT6BP04259 564 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 RGS20O76081 388 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 CRY1Q16526 586 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 TRMT10CQ7L0Y3 403 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PHF21AQ96BD5 680 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 PPWD1Q96BP3 646 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 ZNF184Q99676 751 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 ERP44Q9BS26 406 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 NDUFA13Q9P0J0 144 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 CEP72Q9P209 647 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 AGAP1Q9UPQ3 857 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 THOC2Q8NI27 1593 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 SH3D21A4FU49 640 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 WDR93Q6P2C0 686 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 GPR141Q7Z602 305 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 LRRC20Q8TCA0 184 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 AGAP3Q96P47 875 aa9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 CPSF3Q9UKF6 684 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-203ENST00000553612 CES1P23141 567 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 RCVRNP35243 200 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 GJA9P57773 515 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SPARCL1Q14515 664 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 ZNF618Q5T7W0 954 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 AFF4Q9UHB7 1163 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 DBR1Q9UK59 544 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 TJP3O95049 919 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SHBGP04278 402 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 IFIT1P09914 478 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 NKX2-5P52952 324 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 COPZ1P61923 177 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 ANKRD20A4Q4UJ75 823 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 DDX42Q86XP3 938 aaKnown RBP eCLIP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 CTAGE3PQ8IX95 158 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 KBTBD2Q8IY47 623 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 VPS35Q96QK1 796 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 KIAA1107Q9UPP5 1409 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 NUTM2BA6NNL0 878 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 NUTM2EB1AL46 878 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 APOL1O14791 398 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 RASGRF2O14827 1237 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 THAP12O43422 761 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 TNNI2P48788 182 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SPAG1Q07617 926 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SCRN3Q0VDG4 424 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 MORC3Q14149 939 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 GNA13Q14344 377 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 PLS1Q14651 629 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 ITPRIPL1Q6GPH6 555 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC15A3Q8IY34 581 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 ZNF507Q8TCN5 953 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 HDAC7Q8WUI4 952 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 CASKIN2Q8WXE0 1202 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 TMEM60Q9H2L4 133 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC12A4Q9UP95 1085 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 MUSKO15146 869 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 EXTL3O43909 919 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 NDUFA10O95299 355 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 PDGFRBP09619 1106 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 CCDC130P13994 396 aa9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 EEF1GP26641 437 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-203ENST00000553612 TCF7P36402 384 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms