RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 KMT5AQ9NQR1 393 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 KIAA1671Q9BY89 1806 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 EPOPA6NHQ4 379 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 RAB27AP51159 221 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 UBXN11Q5T124 520 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 PPP4R3CPQ6ZMV5 832 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 CDR2LQ86X02 465 aaPredicted RBP25.17■■□□□ 1.62
TDP1-206ENST00000553569 CMTR2Q8IYT2 770 aaKnown RBP25.17■■□□□ 1.62
TDP1-206ENST00000553569 LPPQ93052 612 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 TRAIPQ9BWF2 469 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 FZD8Q9H461 694 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 ZHX3Q9H4I2 956 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 RNF19AQ9NV58 838 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 ODF2LQ9ULJ1 636 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 PCDHB2Q9Y5E7 798 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 RALGAPA2Q2PPJ7 1873 aa25.17■■□□□ 1.62
TDP1-206ENST00000553569 SLC16A4O15374 487 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 FAM13AO94988 1023 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 SKIP12755 728 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 PLS3P13797 630 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 EFNA5P52803 228 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 ERVK-21P61565 698 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 ZNF598Q86UK7 904 aaKnown RBP25.16■■□□□ 1.62
TDP1-206ENST00000553569 CCDC51Q96ER9 411 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 PRIMPOLQ96LW4 560 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 EIF2AQ9BY44 585 aaKnown RBP25.16■■□□□ 1.62
TDP1-206ENST00000553569 C17orf75Q9HAS0 396 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 USP20Q9Y2K6 914 aa25.16■■□□□ 1.62
TDP1-206ENST00000553569 MRPL42Q9Y6G3 142 aaKnown RBP25.16■■□□□ 1.62
TDP1-206ENST00000553569 PHLPP2Q6ZVD8 1323 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 CNTNAP2Q9UHC6 1331 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 RFXAPO00287 272 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 HOXA2O43364 376 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 TBCAO75347 108 aaKnown RBP25.15■■□□□ 1.62
TDP1-206ENST00000553569 EDN1P05305 212 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 PRPF4BQ13523 1007 aaKnown RBP25.15■■□□□ 1.62
TDP1-206ENST00000553569 GIT2Q14161 759 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 FAM187BQ17R55 369 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 SV2BQ7L1I2 683 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 ABI1Q8IZP0 508 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 DHX58Q96C10 678 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 FAM13BQ9NYF5 915 aa25.15■■□□□ 1.62
TDP1-206ENST00000553569 TTLL13PA6NNM8 815 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 MEIS3P2A8K0S8 358 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 EOMESO95936 686 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 CTNNB1P35222 781 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 TPRNQ4KMQ1 711 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 CLLU1OSQ5K130 101 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 RESP18Q5W5W9 173 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 DYMQ7RTS9 669 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 HELQQ8TDG4 1101 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 GDPD5Q8WTR4 605 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 GAS2L1Q99501 681 aaPredicted RBP25.14■■□□□ 1.62
TDP1-206ENST00000553569 TRIM6Q9C030 488 aaPredicted RBP25.14■■□□□ 1.62
TDP1-206ENST00000553569 SCAND2PQ9GZW5 306 aaPredicted RBP25.14■■□□□ 1.62
TDP1-206ENST00000553569 TMEM117Q9H0C3 514 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 GDPD2Q9HCC8 539 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 LARSQ9P2J5 1176 aaKnown RBP25.14■■□□□ 1.62
TDP1-206ENST00000553569 ARHGAP28Q9P2N2 729 aa25.14■■□□□ 1.62
TDP1-206ENST00000553569 MYMKA6NI61 221 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 K7ERI5 159 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 ACKR2O00590 384 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 NPTXRO95502 500 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 FOSL2P15408 326 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 SMTNP53814 917 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 TMEM192Q8IY95 271 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 MYCT1Q8N699 235 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 FBXO22Q8NEZ5 403 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 SPIRE2Q8WWL2 714 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 CASD1Q96PB1 797 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 PARVGQ9HBI0 331 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 HCSTQ9UBK5 93 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 CHD9Q3L8U1 2897 aa25.13■■□□□ 1.61
TDP1-206ENST00000553569 N4BP3O15049 544 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 ZNF623O75123 536 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 E2F4Q16254 413 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 EPC2Q52LR7 807 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 SPOUT1Q5T280 376 aaKnown RBP25.12■■□□□ 1.61
TDP1-206ENST00000553569 SLC27A1Q6PCB7 646 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 DDX12PQ92771 950 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 PGBD4Q96DM1 585 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 SAMD11Q96NU1 681 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 APOL6Q9BWW8 343 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 PDZD7Q9H5P4 517 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 INPP5FQ9Y2H2 1132 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 RBM19Q9Y4C8 960 aaKnown RBP25.12■■□□□ 1.61
TDP1-206ENST00000553569 HES2Q9Y543 173 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 IPPQ9Y573 584 aa25.12■■□□□ 1.61
TDP1-206ENST00000553569 A0A1B0GUA9 196 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 POLR2DO15514 142 aaKnown RBP25.11■■□□□ 1.61
TDP1-206ENST00000553569 LINC00271P0C7V0 271 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 IGFBP4P22692 258 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 ZNF131P52739 623 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 TAS1R3Q7RTX0 852 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 IQUBQ8NA54 791 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 SMG8Q8ND04 991 aaKnown RBP25.11■■□□□ 1.61
TDP1-206ENST00000553569 STAMQ92783 540 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 NXF3Q9H4D5 531 aaKnown RBP25.11■■□□□ 1.61
TDP1-206ENST00000553569 TMEM134Q9H6X4 195 aa25.11■■□□□ 1.61
TDP1-206ENST00000553569 K7ENM7 598 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 354 ms