RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 MRPL10Q7Z7H8 261 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 MRPL43Q8N983 215 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 VN1R2Q8NFZ6 395 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 CASP10Q92851 521 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 CCDC51Q96ER9 411 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 C8orf76Q96K31 380 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 ZSCAN31Q96LW9 406 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 PHF7Q9BWX1 381 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 MINDY3Q9H8M7 445 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 RSAD1Q9HA92 442 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 UBN1Q9NPG3 1134 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 XPNPEP1Q9NQW7 623 aa16.84■□□□□ 0.29
SDR39U1-205ENST00000553546 NT5C1B-RDH14C9J2C7 533 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 ZBTB39O15060 712 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 HOXA11P31270 313 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 TECP42680 631 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 RARRES1P49788 294 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 PTENP60484 403 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 LONRF3Q496Y0 759 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 ANKRD54Q6NXT1 300 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 NOTUMQ6P988 496 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 IFNLR1Q8IU57 520 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 RNF135Q8IUD6 432 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 SUSD6Q92537 303 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 IGSF21Q96ID5 467 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 FOXP1Q9H334 677 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 SH2B1Q9NRF2 756 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-205ENST00000553546 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 POTEMA6NI47 508 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 MEIS3P2A8K0S8 358 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 LOC730098B7Z3J9 87 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 WNT7AO00755 349 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 GALTP07902 379 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 MCM7P33993 719 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 CA8P35219 290 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 RBM10P98175 930 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 CBX2Q14781 532 aaPredicted RBP16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 DDX53Q86TM3 631 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 VPS52Q8N1B4 723 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 TMEM87AQ8NBN3 555 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 ERMNQ8TAM6 284 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 TMEM175Q9BSA9 504 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 NFKBIZQ9BYH8 718 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 ZBP1Q9H171 429 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 TUFT1Q9NNX1 390 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 IRAK3Q9Y616 596 aa16.82■□□□□ 0.28
SDR39U1-205ENST00000553546 INO80B-WBP1J3KQ70 363 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 TSPAN1O60635 241 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 CXCL14O95715 111 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 ATP2B1P20020 1258 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 ARL2P36404 184 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 GNL2Q13823 731 aaKnown RBP16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 UBXN11Q5T124 520 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 HACE1Q8IYU2 909 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 FAM193BQ96PV7 902 aaPredicted RBP16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 GBP3Q9H0R5 595 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 TMEM60Q9H2L4 133 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 MUTYHQ9UIF7 546 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 HCFC2Q9Y5Z7 792 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 TECTAO75443 2155 aa16.81■□□□□ 0.28
SDR39U1-205ENST00000553546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 CTSAP10619 480 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 ITGA4P13612 1032 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 TRAPPC10P48553 1259 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 SLC11A1P49279 550 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 ITIH3Q06033 890 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 CAPSQ13938 189 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 SYCE2Q6PIF2 218 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 MCPH1Q8NEM0 835 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 PIGOQ8TEQ8 1089 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 NACC1Q96RE7 527 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 CSRNP2Q9H175 543 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 S1PR5Q9H228 398 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 DNAJB4Q9UDY4 337 aa16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 DBR1Q9UK59 544 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-205ENST00000553546 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 SPATA31C1P0DKV0 1188 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 GLRA2P23416 452 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 MBTD1Q05BQ5 628 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 HAUS3Q68CZ6 603 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 CES5AQ6NT32 575 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 ZNF280BQ86YH2 543 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms