RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PPME1Q9Y570 386 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 IPPQ9Y573 584 aa20.25■□□□□ 0.83
SHMT2-206ENST00000553529 LRRIQ4A6NIV6 560 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 E9PMD0 336 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 HOXA2O43364 376 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 MBTPS2O43462 519 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 SLC11A1P49279 550 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 NOMO2Q5JPE7 1267 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 PADI6Q6TGC4 694 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 RABGGTAQ92696 567 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 ZFP42Q96MM3 310 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 TLE6Q9H808 572 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 AAASQ9NRG9 546 aa20.24■□□□□ 0.83
SHMT2-206ENST00000553529 NOL7Q9UMY1 257 aaKnown RBP20.24■□□□□ 0.83
SHMT2-206ENST00000553529 FAM86C2PA6NEL3 165 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 LIG1P18858 919 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 RPA1P27694 616 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 FXR2P51116 673 aaKnown RBP eCLIP20.23■□□□□ 0.83
SHMT2-206ENST00000553529 PLCB3Q01970 1234 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 DUSP6Q16828 381 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 KANK3Q6NY19 840 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 PLIN2Q99541 437 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 BHMT2Q9H2M3 363 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 ENTPD7Q9NQZ7 604 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 FOXD4L1Q9NU39 408 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
SHMT2-206ENST00000553529 SPG21Q9NZD8 308 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 LRWD1Q9UFC0 647 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 KIAA1024Q9UPX6 916 aa20.23■□□□□ 0.83
SHMT2-206ENST00000553529 GAS2O43903 313 aaKnown RBP20.22■□□□□ 0.83
SHMT2-206ENST00000553529 ZNF623O75123 536 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 ERLIN2O94905 339 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 NPTXRO95502 500 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 GALTP07902 379 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 AKAP5P24588 427 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 MLH1P40692 756 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 TRAPPC10P48553 1259 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 MRPL10Q7Z7H8 261 aaKnown RBP20.22■□□□□ 0.83
SHMT2-206ENST00000553529 EFHBQ8N7U6 833 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 IGSF22Q8N9C0 903 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 SNX29Q8TEQ0 813 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 LRRC15Q8TF66 581 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 GAD1Q99259 594 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 RSAD1Q9HA92 442 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
SHMT2-206ENST00000553529 KLK14Q9P0G3 267 aa20.22■□□□□ 0.83
SHMT2-206ENST00000553529 DBR1Q9UK59 544 aaKnown RBP20.22■□□□□ 0.83
SHMT2-206ENST00000553529 ARHGEF35A5YM69 484 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 ASAP2O43150 1006 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 CA8P35219 290 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 GRIN1Q05586 938 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 MXD4Q14582 209 aaPredicted RBP20.21■□□□□ 0.83
SHMT2-206ENST00000553529 ZRSR1Q15695 479 aaKnown RBP20.21■□□□□ 0.83
SHMT2-206ENST00000553529 GLB1LQ6UWU2 654 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 IFNLR1Q8IU57 520 aaPredicted RBP20.21■□□□□ 0.83
SHMT2-206ENST00000553529 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 C11orf16Q9NQ32 467 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 CD207Q9UJ71 328 aa20.21■□□□□ 0.83
SHMT2-206ENST00000553529 SSBP05455 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHMT2-206ENST00000553529 NCLP19338 710 aaKnown RBP20.2■□□□□ 0.82
SHMT2-206ENST00000553529 SSTR3P32745 418 aaPredicted RBP20.2■□□□□ 0.82
SHMT2-206ENST00000553529 RAB27AP51159 221 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 SCNN1GP51170 649 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 UBE3AQ05086 875 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 ZP2Q05996 745 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 TFDP1Q14186 410 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 EEF1DP3Q658K8 133 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 EXOC8Q8IYI6 725 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 GJD3Q8N144 294 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 ERMNQ8TAM6 284 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 PNMA5Q96PV4 448 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 MRPL9Q9BYD2 267 aaKnown RBP20.2■□□□□ 0.82
SHMT2-206ENST00000553529 CSRNP2Q9H175 543 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
SHMT2-206ENST00000553529 SMC3Q9UQE7 1217 aa20.2■□□□□ 0.82
SHMT2-206ENST00000553529 C2orf71A6NGG8 1288 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 H3BQV1 296 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 ITGA4P13612 1032 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 CYP11B2P19099 503 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 RNASELQ05823 741 aaKnown RBP20.19■□□□□ 0.82
SHMT2-206ENST00000553529 ORC2Q13416 577 aaPredicted RBP20.19■□□□□ 0.82
SHMT2-206ENST00000553529 KCNC3Q14003 757 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 CDCA2Q69YH5 1023 aaPredicted RBP20.19■□□□□ 0.82
SHMT2-206ENST00000553529 NOTUMQ6P988 496 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 TAS1R1Q7RTX1 841 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 VPS52Q8N1B4 723 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 GSTCDQ8NEC7 633 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 IGSF21Q96ID5 467 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 BACH2Q9BYV9 841 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 CCDC113Q9H0I3 377 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 MARCH5Q9NX47 278 aa20.19■□□□□ 0.82
SHMT2-206ENST00000553529 PRG3Q9Y2Y8 225 aaPredicted RBP20.19■□□□□ 0.82
SHMT2-206ENST00000553529 ARL5CA6NH57 179 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 WEE2P0C1S8 567 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 XRCC6P12956 609 aaKnown RBP eCLIP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms