RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TIGD5Q53EQ6 642 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 SYT2Q8N9I0 419 aaPredicted RBP21.35■■□□□ 1.01
PTCH1-227ENST00000553256 CPB2Q96IY4 423 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 PRIMPOLQ96LW4 560 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 COL25A1Q9BXS0 654 aaPredicted RBP21.35■■□□□ 1.01
PTCH1-227ENST00000553256 CSRNP2Q9H175 543 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 NSUN3Q9H649 340 aaKnown RBP21.35■■□□□ 1.01
PTCH1-227ENST00000553256 BLOC1S4Q9NUP1 217 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 COG5Q9UP83 839 aa21.35■■□□□ 1.01
PTCH1-227ENST00000553256 FSCN2O14926 492 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 FGF18O76093 207 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 BMP1P13497 986 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 LAG3P18627 525 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 KCNT2Q6UVM3 1135 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 RNF169Q8NCN4 708 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 GSTCDQ8NEC7 633 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 POF1BQ8WVV4 589 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 KIFAP3Q92845 792 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 TBC1D13Q9NVG8 400 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 FBXO2Q9UK22 296 aaPredicted RBP21.34■■□□□ 1.01
PTCH1-227ENST00000553256 IPPQ9Y573 584 aa21.34■■□□□ 1.01
PTCH1-227ENST00000553256 CNTNAP2Q9UHC6 1331 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 LRRIQ4A6NIV6 560 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 GUCY2CP25092 1073 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 LONP1P36776 959 aaKnown RBP21.33■■□□□ 1.01
PTCH1-227ENST00000553256 LTBRP36941 435 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 PBX3P40426 434 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 UBE3AQ05086 875 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 ARSHQ5FYA8 562 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 TJAP1Q5JTD0 557 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 NOTUMQ6P988 496 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 USP49Q70CQ1 688 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 TAS1R3Q7RTX0 852 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 SLC39A11Q8N1S5 342 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 HLA-CQ95604 372 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 USP28Q96RU2 1077 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 KIFC3Q9BVG8 833 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 NRDE2Q9H7Z3 1164 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 PRMT7Q9NVM4 692 aaPredicted RBP21.33■■□□□ 1.01
PTCH1-227ENST00000553256 LZTS1Q9Y250 596 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 PCDHB12Q9Y5F1 795 aa21.33■■□□□ 1.01
PTCH1-227ENST00000553256 ACKR2O00590 384 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 ERLIN2O94905 339 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 ERVFC1P60507 584 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 MRPS5P82675 430 aaKnown RBP21.32■■□□□ 1
PTCH1-227ENST00000553256 HYAL1Q12794 435 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 CSPP1Q1MSJ5 1256 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 LONRF3Q496Y0 759 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 NOMO2Q5JPE7 1267 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 CABP7Q86V35 215 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 TMEM173Q86WV6 379 aaPredicted RBP21.32■■□□□ 1
PTCH1-227ENST00000553256 KCNN1Q92952 543 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 PGBD4Q96DM1 585 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 NTPCRQ9BSD7 190 aaKnown RBP21.32■■□□□ 1
PTCH1-227ENST00000553256 MRPL9Q9BYD2 267 aaKnown RBP21.32■■□□□ 1
PTCH1-227ENST00000553256 CCSER1Q9C0I3 900 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 NT5C3AQ9H0P0 336 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 AAASQ9NRG9 546 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 ARHGAP28Q9P2N2 729 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 HES2Q9Y543 173 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 PCDHGC5Q9Y5F6 944 aa21.32■■□□□ 1
PTCH1-227ENST00000553256 HIP1RO75146 1068 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 NPTX2P47972 431 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 NASPP49321 788 aaPredicted RBP21.31■■□□□ 1
PTCH1-227ENST00000553256 GLB1LQ6UWU2 654 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 ADGRD2Q7Z7M1 963 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 CDR2LQ86X02 465 aaPredicted RBP21.31■■□□□ 1
PTCH1-227ENST00000553256 ZNF280BQ86YH2 543 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 ABI1Q8IZP0 508 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 CNNM3Q8NE01 707 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 BCL7CQ8WUZ0 217 aaPredicted RBP21.31■■□□□ 1
PTCH1-227ENST00000553256 C2orf40Q9H1Z8 148 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 ZSCAN16Q9H4T2 348 aaPredicted RBP21.31■■□□□ 1
PTCH1-227ENST00000553256 PDZD7Q9H5P4 517 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 UBE2ZQ9H832 354 aaPredicted RBP21.31■■□□□ 1
PTCH1-227ENST00000553256 RSAD1Q9HA92 442 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 MIOSQ9NXC5 875 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 USP20Q9Y2K6 914 aa21.31■■□□□ 1
PTCH1-227ENST00000553256 SRPRBQ9Y5M8 271 aaKnown RBP21.31■■□□□ 1
PTCH1-227ENST00000553256 NCOR1O75376 2440 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 DDHD2O94830 711 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 EFEMP2O95967 443 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 PLA2G4BP0C869 781 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 GTF2F1P35269 517 aaKnown RBP eCLIP21.3■■□□□ 1
PTCH1-227ENST00000553256 KCNQ1P51787 676 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 BCAR1P56945 870 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 SLC39A14Q15043 492 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 PPP2R5AQ15172 486 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 NT5DC1Q5TFE4 455 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 SLC27A1Q6PCB7 646 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 MRPS27Q92552 414 aaKnown RBP21.3■■□□□ 1
PTCH1-227ENST00000553256 PABPC5Q96DU9 382 aaKnown RBP21.3■■□□□ 1
PTCH1-227ENST00000553256 ZNF558Q96NG5 402 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 PLIN2Q99541 437 aa21.3■■□□□ 1
PTCH1-227ENST00000553256 NXF3Q9H4D5 531 aaKnown RBP21.3■■□□□ 1
PTCH1-227ENST00000553256 ZMYM2Q9UBW7 1377 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 ABLIM1O14639 778 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 GALTP07902 379 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 DSC1Q08554 894 aa21.29■■□□□ 1
PTCH1-227ENST00000553256 PKP1Q13835 747 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms