RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 ZNF410Q86VK4 478 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 UBALD2Q8IYN6 164 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 VPS52Q8N1B4 723 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 MRPL43Q8N983 215 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 CRYGNQ8WXF5 182 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 SUSD6Q92537 303 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 SLC5A5Q92911 643 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 EMILIN2Q9BXX0 1053 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 NCOA5Q9HCD5 579 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 DDX25Q9UHL0 483 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 SNX14Q9Y5W7 946 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 A0A087WZ62 844 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 C2orf71A6NGG8 1288 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 GOLGA8CPA6NN73 597 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 NT5C1B-RDH14C9J2C7 533 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 ZNF862O60290 1169 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 NR1I2O75469 434 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
TMEM116-217ENST00000552801 PDIA3P30101 505 aaKnown RBP9.74□□□□□ -0.85
TMEM116-217ENST00000552801 PHKA2P46019 1235 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 PSMC5P62195 406 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 Q4G0T1 1027 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 NOMO2Q5JPE7 1267 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 CLLU1OSQ5K130 101 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 LRRC55Q6ZSA7 311 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 KRT25Q7Z3Z0 450 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 BLIDQ8IZY5 108 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 SLC39A11Q8N1S5 342 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 KREMEN2Q8NCW0 462 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 VN1R2Q8NFZ6 395 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-217ENST00000552801 NAP1L4Q99733 375 aaKnown RBP9.74□□□□□ -0.85
TMEM116-217ENST00000552801 FDXACB1Q9BRP7 624 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-217ENST00000552801 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
TMEM116-217ENST00000552801 ADAM7Q9H2U9 754 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 SORCS3Q9UPU3 1222 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 HCFC2Q9Y5Z7 792 aa9.74□□□□□ -0.85
TMEM116-217ENST00000552801 NID2Q14112 1375 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
TMEM116-217ENST00000552801 ERLIN2O94905 339 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 BAG4O95429 457 aaKnown RBP9.73□□□□□ -0.85
TMEM116-217ENST00000552801 KLRC2P26717 231 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 STK3Q13188 491 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 UGCGQ16739 394 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 SYCE2Q6PIF2 218 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 RUFY3Q7L099 469 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 OTUD6AQ7L8S5 288 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 FAM177A1Q8N128 213 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-217ENST00000552801 TCP11Q8WWU5 503 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 PSPC1Q8WXF1 523 aaKnown RBP9.73□□□□□ -0.85
TMEM116-217ENST00000552801 LENG9Q96B70 501 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 CEP170P1Q96L14 293 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 BRMS1Q9HCU9 246 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 KANSL3Q9P2N6 904 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 DPP7Q9UHL4 492 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 SSX2IPQ9Y2D8 614 aa9.73□□□□□ -0.85
TMEM116-217ENST00000552801 TECTAO75443 2155 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 PSMD10O75832 226 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 TDP2O95551 362 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 ALDH2P05091 517 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 SSBP05455 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
TMEM116-217ENST00000552801 SRGAP2CP0DJJ0 459 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 AVPR2P30518 371 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 QARSP47897 775 aaKnown RBP9.72□□□□□ -0.85
TMEM116-217ENST00000552801 KIAA1841Q6NSI8 718 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 DDX53Q86TM3 631 aaKnown RBP9.72□□□□□ -0.85
TMEM116-217ENST00000552801 FBXL16Q8N461 479 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 LINC01465Q8N7H1 131 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 PRSS33Q8NF86 280 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 LPPQ93052 612 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 GJA10Q969M2 543 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 IGSF21Q96ID5 467 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 SH2D3AQ9BRG2 576 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-217ENST00000552801 POMKQ9H5K3 350 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 MRPL17Q9NRX2 175 aaKnown RBP9.72□□□□□ -0.85
TMEM116-217ENST00000552801 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 COL4A3BPQ9Y5P4 624 aa9.72□□□□□ -0.85
TMEM116-217ENST00000552801 TMEM150BA6NC51 233 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 ADAMTS3O15072 1205 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 GAS2O43903 313 aaKnown RBP9.71□□□□□ -0.86
TMEM116-217ENST00000552801 CCNT1O60563 726 aaKnown RBP9.71□□□□□ -0.86
TMEM116-217ENST00000552801 GFRA3O60609 400 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-217ENST00000552801 URODP06132 367 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 P4HBP07237 508 aaKnown RBP9.71□□□□□ -0.86
TMEM116-217ENST00000552801 WEE2P0C1S8 567 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 CTSAP10619 480 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 GCFC2P16383 781 aaKnown RBP9.71□□□□□ -0.86
TMEM116-217ENST00000552801 RFC5P40937 340 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 DRP2Q13474 957 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 TFDP1Q14186 410 aa9.71□□□□□ -0.86
TMEM116-217ENST00000552801 TARBP2Q15633 366 aaKnown RBP9.71□□□□□ -0.86
TMEM116-217ENST00000552801 NTRK3Q16288 839 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms