RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 INO80BQ9C086 356 aaPredicted RBP10.08□□□□□ -0.8
CCDC59-207ENST00000552606 MTIF3Q9H2K0 278 aaKnown RBP10.08□□□□□ -0.8
CCDC59-207ENST00000552606 FZD8Q9H461 694 aa10.08□□□□□ -0.8
CCDC59-207ENST00000552606 RC3H2Q9HBD1 1191 aaKnown RBP10.08□□□□□ -0.8
CCDC59-207ENST00000552606 USP25Q9UHP3 1055 aa10.08□□□□□ -0.8
CCDC59-207ENST00000552606 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
CCDC59-207ENST00000552606 SFI1A8K8P3 1242 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 C9IYK1 514 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 INO80B-WBP1J3KQ70 363 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 B4GALT5O43286 388 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 TBCAO75347 108 aaKnown RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 PPP1R37O75864 691 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 FAM13AO94988 1023 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 ATF7P17544 494 aaPredicted RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 ARF4P18085 180 aaPredicted RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 CASP1P29466 404 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 NFX1Q12986 1120 aaKnown RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 SNW1Q13573 536 aaKnown RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 DYMQ7RTS9 669 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 CATSPER4Q7RTX7 472 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 SFR1Q86XK3 245 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 ZBTB8OSQ8IWT0 167 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 GRAMD1CQ8IYS0 662 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 IFT74Q96LB3 600 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 PRIMPOLQ96LW4 560 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 GBP4Q96PP9 640 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 C7orf25Q9BPX7 421 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 TRAIPQ9BWF2 469 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 C2orf40Q9H1Z8 148 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 PARVGQ9HBI0 331 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 KMT5AQ9NQR1 393 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 RGS18Q9NS28 235 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 PIN4Q9Y237 131 aaKnown RBP10.07□□□□□ -0.8
CCDC59-207ENST00000552606 SLC4A7Q9Y6M7 1214 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 CHD9Q3L8U1 2897 aa10.07□□□□□ -0.8
CCDC59-207ENST00000552606 ZBBXA8MT70 800 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 SOX1O00570 391 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 ENPP3O14638 875 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 SLC16A4O15374 487 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 KLRC4O43908 158 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 ZNF202O95125 648 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 PRKCBP05771 671 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 KRT18P05783 430 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 ATP2A2P16615 1042 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 LIG1P18858 919 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 AXLP30530 894 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 SARSP49591 514 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 EFNA5P52803 228 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 FAM160A1Q05DH4 1040 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 COASYQ13057 564 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 UBXN11Q5T124 520 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 TMCO2Q7Z6W1 182 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 ZNF598Q86UK7 904 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 PHOSPHO2Q8TCD6 241 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 TOP1MTQ969P6 601 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 PAGE5Q96GU1 130 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 ADAM2Q99965 735 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 STRA6Q9BX79 667 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 FGFBP2Q9BYJ0 223 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 ST6GALNAC4Q9H4F1 302 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 CHST12Q9NRB3 414 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 OLFML3Q9NRN5 406 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 C1orf112Q9NSG2 853 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 RNF19AQ9NV58 838 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 PRMT7Q9NVM4 692 aaPredicted RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 LARSQ9P2J5 1176 aaKnown RBP10.06□□□□□ -0.8
CCDC59-207ENST00000552606 SEL1LQ9UBV2 794 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 CHD7Q9P2D1 2997 aa10.06□□□□□ -0.8
CCDC59-207ENST00000552606 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 GRXCR1A8MXD5 290 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 K7ENM7 598 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 ACKR2O00590 384 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 ABLIM1O14639 778 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 TRAK2O60296 914 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 NR1I2O75469 434 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 ERLIN2O94905 339 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 GJB5O95377 273 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 AMHP03971 560 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 GAP43P17677 238 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 PTMSP20962 102 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 KCNJ6P48051 423 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 CASP5P51878 434 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 UBE2HP62256 183 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 ASIC1P78348 528 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 FAM189BP81408 668 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 HTRA4P83105 476 aaPredicted RBP10.05□□□□□ -0.8
CCDC59-207ENST00000552606 CUL4BQ13620 913 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 MAPK6Q16659 721 aa10.05□□□□□ -0.8
CCDC59-207ENST00000552606 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms