RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 TYRP1P17643 537 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 BCAR1P56945 870 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 FAM189BP81408 668 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 VPS72Q15906 364 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 TMEM177Q53S58 311 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 PRR16Q569H4 304 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 C2orf27AQ580R0 203 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 GDF7Q7Z4P5 450 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 ARHGEF19Q8IW93 802 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 ZSWIM2Q8NEG5 633 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 COQ10AQ96MF6 247 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 DCLRE1CQ96SD1 692 aaKnown RBP5.3□□□□□ -1.56
USP44-207ENST00000552237 NDC1Q9BTX1 674 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 PTCH2Q9Y6C5 1203 aa5.3□□□□□ -1.56
USP44-207ENST00000552237 TMEM200CA6NKL6 621 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 PROB1E7EW31 1015 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
USP44-207ENST00000552237 DNAJC6O75061 913 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 FSBPO95073 299 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 NPTXRO95502 500 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 PTH2RP49190 550 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 MAN2A1Q16706 1144 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 ZC3H12BQ5HYM0 836 aaKnown RBP5.29□□□□□ -1.56
USP44-207ENST00000552237 METTL24Q5JXM2 366 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 MICALCLQ6ZW33 695 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 IGSF22Q8N9C0 903 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 OR5M3Q8NGP4 307 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 PDCD2LQ9BRP1 358 aa5.29□□□□□ -1.56
USP44-207ENST00000552237 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP44-207ENST00000552237 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.28□□□□□ -1.56
USP44-207ENST00000552237 GAGE12BA1L429 117 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 GAGE12HA6NDE8 117 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 SEC24CP53992 1094 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 GUCY1B3Q02153 619 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 LILRA3Q8N6C8 439 aaPredicted RBP5.28□□□□□ -1.56
USP44-207ENST00000552237 JMYQ8N9B5 988 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 SIMC1Q8NDZ2 872 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 OR52N2Q8NGI0 321 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 SH3TC2Q8TF17 1288 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 SMG7Q92540 1137 aaKnown RBP5.28□□□□□ -1.56
USP44-207ENST00000552237 CPEB1Q9BZB8 566 aaKnown RBP5.28□□□□□ -1.56
USP44-207ENST00000552237 KANSL2Q9H9L4 492 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 ACSS2Q9NR19 701 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 FRMD4BQ9Y2L6 1034 aa5.28□□□□□ -1.56
USP44-207ENST00000552237 TNPO3Q9Y5L0 923 aaKnown RBP5.28□□□□□ -1.56
USP44-207ENST00000552237 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
USP44-207ENST00000552237 ZBTB48P10074 688 aaPredicted RBP5.27□□□□□ -1.57
USP44-207ENST00000552237 CTGFP29279 349 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 PLA2G5P39877 138 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 DDB1Q16531 1140 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 ARHGAP44Q17R89 818 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 NME9Q86XW9 330 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 PLXDC1Q8IUK5 500 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 CAGE1Q8TC20 777 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 LINC00476Q8WZB0 136 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 ING3Q9NXR8 418 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 RNF7Q9UBF6 113 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 TLK1Q9UKI8 766 aa5.27□□□□□ -1.57
USP44-207ENST00000552237 CCDC163A0A0D9SF12 145 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 UNC119BA6NIH7 251 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 PRR5-ARHGAP8B1AHC4 643 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 APOL3O95236 402 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 HLA-DOAP06340 250 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 PTTG1IPP53801 180 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 BLOC1S1P78537 153 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 CPEB3Q8NE35 698 aaKnown RBP5.26□□□□□ -1.57
USP44-207ENST00000552237 GSTCDQ8NEC7 633 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 IL17RAQ96F46 866 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 KIAA1586Q9HCI6 787 aa5.26□□□□□ -1.57
USP44-207ENST00000552237 ZNF185O15231 689 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 ALDH1A2O94788 518 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 CYP17A1P05093 508 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 HSP90B1P14625 803 aaKnown RBP5.25□□□□□ -1.57
USP44-207ENST00000552237 CASRP41180 1078 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 WNT3AP56704 352 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 RNASE9P60153 205 aaKnown RBP5.25□□□□□ -1.57
USP44-207ENST00000552237 MXRA7P84157 204 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 ADCY2Q08462 1091 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 FOXI1Q12951 378 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 SQSTM1Q13501 440 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 ZNF174Q15697 407 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 BEAN1Q3B7T3 259 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 TIGD7Q6NT04 549 aaPredicted RBP5.25□□□□□ -1.57
USP44-207ENST00000552237 SPATA31D4Q6ZUB0 917 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 OTOP1Q7RTM1 612 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 HIST1H2AHQ96KK5 128 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 HIST1H2AJQ99878 128 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 LRFN3Q9BTN0 628 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 SLC29A3Q9BZD2 475 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 OSBPL6Q9BZF3 934 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 MTG2Q9H4K7 406 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 SPON1Q9HCB6 807 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 CLCA2Q9UQC9 943 aa5.25□□□□□ -1.57
USP44-207ENST00000552237 PIPSLA2A3N6 862 aa5.24□□□□□ -1.57
USP44-207ENST00000552237 H7C1D1 291 aa5.24□□□□□ -1.57
USP44-207ENST00000552237 DDX6P26196 483 aaKnown RBP eCLIP5.24□□□□□ -1.57
USP44-207ENST00000552237 BMPR1AP36894 532 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms