RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 CXCL11O14625 94 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 FTCDO95954 541 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 ATP4AP20648 1035 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 EDNRBP24530 442 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 PAFAH1B1P43034 410 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 IRX3P78415 501 aaPredicted RBP15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 KIF22Q14807 665 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 SNRNP35Q16560 246 aaKnown RBP15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 SLC39A4Q6P5W5 647 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 NCAPG2Q86XI2 1143 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 DNAAF5Q86Y56 855 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 CBWD2Q8IUF1 395 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 IFT74Q96LB3 600 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 ZNF302Q9NR11 478 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 RNF14Q9UBS8 474 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 L1RE1Q9UN81 338 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 ADGRA3Q8IWK6 1321 aa15.21■□□□□ 0.03
RAB3IP-216ENST00000552199 A0A0A6YYK5 440 aaPredicted RBP15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 MCM3P25205 808 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 MTERF2Q49AM1 385 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 CCDC181Q5TID7 509 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 ARHGEF19Q8IW93 802 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 ANKRD13AQ8IZ07 590 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 SPATA4Q8NEY3 305 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 ZNF526Q8TF50 670 aaPredicted RBP15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 SAAL1Q96ER3 474 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 CLMNQ96JQ2 1002 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 POLR3FQ9H1D9 316 aaPredicted RBP15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.02
RAB3IP-216ENST00000552199 IGKV6D-21A0A0A0MT36 114 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 H0YCG3 227 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 MAP2K7O14733 419 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 CNMDO75829 334 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 NOP2P46087 812 aaKnown RBP15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 MXI1P50539 228 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 C9orf131Q5VYM1 1079 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 TMC2Q8TDI7 906 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 PARD3BQ8TEW8 1205 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 CDCA5Q96FF9 252 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 MFSD14AQ96MC6 490 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 FBXL18Q96ME1 805 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 ASCC2Q9H1I8 757 aaPredicted RBP15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
RAB3IP-216ENST00000552199 SPDYE5A6NIY4 337 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 LRRN2O75325 713 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 OATP04181 439 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 TNFAIP3P21580 790 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 ABCD1P33897 745 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 NF2P35240 595 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 GALCP54803 685 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 EMC2Q15006 297 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 BRDTQ58F21 947 aaPredicted RBP15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 TAS1R3Q7RTX0 852 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 HDXQ7Z353 690 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 LRRC57Q8N9N7 239 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 POMGNT1Q8WZA1 660 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 UBXN6Q9BZV1 441 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 EHD2Q9NZN4 543 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 GSTTP1A0A1W2PQM5 241 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 GARTP22102 1010 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 UBA1P22314 1058 aaKnown RBP15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 POLGP54098 1239 aaPredicted RBP15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 CFAP221Q4G0U5 840 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 MOB2Q70IA6 237 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 TPCN2Q8NHX9 752 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 NIFKQ9BYG3 293 aaKnown RBP15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 KCNH4Q9UQ05 1017 aa15.19■□□□□ 0.02
RAB3IP-216ENST00000552199 UTRNP46939 3433 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 SLC25A27O95847 323 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 ENPEPQ07075 957 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 CYP24A1Q07973 514 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 KRT39Q6A163 491 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 CCDC127Q96BQ5 260 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 MS4A14Q96JA4 679 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 AGPAT1Q99943 283 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 TMEM8AQ9HCN3 771 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 PACSIN2Q9UNF0 486 aaPredicted RBP15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 COQ4Q9Y3A0 265 aa15.18■□□□□ 0.02
RAB3IP-216ENST00000552199 CES2O00748 559 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 HNRNPDLO14979 420 aaKnown RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 FARP2O94887 1054 aaPredicted RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 TMEM253P0C7T8 217 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 TGFB3P10600 412 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 YBX3P16989 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 GTF2H1P32780 548 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms