RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 PUS10Q3MIT2 529 aaKnown RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 EPC2Q52LR7 807 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 FAM102BQ5T8I3 360 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 SRGAP1Q7Z6B7 1085 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 RTN4RL1Q86UN2 441 aaPredicted RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 ZBTB8OSQ8IWT0 167 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TMEM192Q8IY95 271 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 CMTR2Q8IYT2 770 aaKnown RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 RNF149Q8NC42 400 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 MCPH1Q8NEM0 835 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 GDPD5Q8WTR4 605 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TMEM40Q8WWA1 233 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 HLA-CQ95604 372 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 PGBD4Q96DM1 585 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 CALML4Q96GE6 196 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 IFT74Q96LB3 600 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 C17orf80Q9BSJ5 609 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TRAIPQ9BWF2 469 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TRIM6Q9C030 488 aaPredicted RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 POLR3FQ9H1D9 316 aaPredicted RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 ADAMTS10Q9H324 1103 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TMX1Q9H3N1 280 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 ELAC1Q9H777 363 aaKnown RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 CHST12Q9NRB3 414 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 DDX19AQ9NUU7 478 aaKnown RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TMEM161AQ9NX61 479 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 DBR1Q9UK59 544 aaKnown RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 PCDHB12Q9Y5F1 795 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 ATG2AQ2TAZ0 1938 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 C9IYK1 514 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 INO80B-WBP1J3KQ70 363 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 MGEA5O60502 916 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 ARHGEF15O94989 841 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 EOMESO95936 686 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 SPATA31C1P0DKV0 1188 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 LIG1P18858 919 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 NDUFV2P19404 249 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 SYT1P21579 422 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 AXLP30530 894 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 BMPR1AP36894 532 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 UBA7P41226 1012 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 RARRES1P49788 294 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 RAB27AP51159 221 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 GUCA2AQ02747 115 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 ADGRE1Q14246 886 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 PPP2R5AQ15172 486 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 SF3A1Q15459 793 aaKnown RBP6.54□□□□□ -1.36
CCDC65-204ENST00000552188 ARL6IP4Q66PJ3 421 aaKnown RBP6.54□□□□□ -1.36
CCDC65-204ENST00000552188 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 CABP7Q86V35 215 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 HACE1Q8IYU2 909 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 C4orf32Q8N8J7 132 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 LINC01599Q8WXQ3 324 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 SNX21Q969T3 373 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 CEP89Q96ST8 783 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 C11orf84Q9BUA3 381 aaPredicted RBP6.54□□□□□ -1.36
CCDC65-204ENST00000552188 NT5C3AQ9H0P0 336 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 BHMT2Q9H2M3 363 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 ZSCAN16Q9H4T2 348 aaPredicted RBP6.54□□□□□ -1.36
CCDC65-204ENST00000552188 LMCD1Q9NZU5 365 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 TCF20Q9UGU0 1960 aaKnown RBP6.54□□□□□ -1.36
CCDC65-204ENST00000552188 COL4A6Q14031 1691 aa6.54□□□□□ -1.36
CCDC65-204ENST00000552188 RANBP2P49792 3224 aaKnown RBP6.54□□□□□ -1.36
CCDC65-204ENST00000552188 TRIP11Q15643 1979 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PP2D1A8MPX8 630 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 E9PMD0 336 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 H3BNC9 293 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 STX6O43752 255 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 LPXNO60711 386 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CSPG5O95196 566 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 FGFR1P11362 822 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CDC25AP30304 524 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CA8P35219 290 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 TXLNAP40222 546 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 GATMP50440 423 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 ATP2C1P98194 919 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CEBPZQ03701 1054 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 RNASELQ05823 741 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 DSC3Q14574 896 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 BMS1Q14692 1282 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 STK38Q15208 465 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PCBP1Q15365 356 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CSPP1Q1MSJ5 1256 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 LONRF3Q496Y0 759 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 FOXD4L5Q5VV16 416 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 NOTUMQ6P988 496 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 GLB1LQ6UWU2 654 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 APBB1IPQ7Z5R6 666 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 SPRED2Q7Z698 418 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 ECHDC2Q86YB7 292 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 THNSL1Q8IYQ7 743 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 IGSF22Q8N9C0 903 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CNNM3Q8NE01 707 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 DEPTORQ8TB45 409 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 URGCPQ8TCY9 931 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms