RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SLC7A3Q8WY07 619 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 STAMQ92783 540 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 RSAD1Q9HA92 442 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 COL4A3BPQ9Y5P4 624 aa15.9■□□□□ 0.14
CHMP1A-210ENST00000551981 DKC1O60832 514 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 URODP06132 367 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 ADH1AP07327 375 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 NPR3P17342 541 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 RFX1P22670 979 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 ANGPT1Q15389 498 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 B3GNT9Q6UX72 402 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 CYP26C1Q6V0L0 522 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 AGMOQ6ZNB7 445 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 ANO5Q75V66 913 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 MRPL10Q7Z7H8 261 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 DTWD2Q8NBA8 298 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 CMASQ8NFW8 434 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 IFT122Q9HBG6 1241 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 MAN1C1Q9NR34 630 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 PCDHA4Q9UN74 947 aa15.89■□□□□ 0.13
CHMP1A-210ENST00000551981 STK25O00506 426 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 PI15O43692 258 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 B4GALT3O60512 393 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 LILRB3O75022 631 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 DDHD2O94830 711 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 TDP2O95551 362 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 SOD2P04179 222 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 RPS6KB1P23443 525 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 GBP2P32456 591 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 ID4P47928 161 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 AK2P54819 239 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 PLA2G4FQ68DD2 849 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 MOXD1Q6UVY6 613 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 SRGAP1Q7Z6B7 1085 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 CNNM3Q8NE01 707 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 ETNPPLQ8TBG4 499 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 KCNB2Q92953 911 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 PPME1Q9Y570 386 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 DCHS1Q96JQ0 3298 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 CACNA1AO00555 2505 aa15.88■□□□□ 0.13
CHMP1A-210ENST00000551981 C2CD2LO14523 706 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 NRP1O14786 923 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 GLUD1P00367 558 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 POMCP01189 267 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 PSMA5P28066 241 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 QARSP47897 775 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 FEZF2Q8TBJ5 459 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 PSPC1Q8WXF1 523 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 MBOAT7Q96N66 472 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 RPS6KC1Q96S38 1066 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 HERC2P3Q9BVR0 1158 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 AGXT2Q9BYV1 514 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 RHOBTB2Q9BYZ6 727 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 NCOA5Q9HCD5 579 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 WDR6Q9NNW5 1121 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 WNT16Q9UBV4 365 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 SNX14Q9Y5W7 946 aa15.87■□□□□ 0.13
CHMP1A-210ENST00000551981 CCDC195A0A1B0GUA6 201 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 NR1I2O75469 434 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 SRGAP2CP0DJJ0 459 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 HSPA4P34932 840 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 RFC5P40937 340 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 GLUD2P49448 558 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 SSRP1Q08945 709 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 GALNT17Q6IS24 598 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 BLIDQ8IZY5 108 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 FAM177A1Q8N128 213 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 KCNG4Q8TDN1 519 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 PRPF31Q8WWY3 499 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 NXPE3Q969Y0 559 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 CEP170P1Q96L14 293 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 SEMA4AQ9H3S1 761 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 PRG3Q9Y2Y8 225 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 CLUHO75153 1309 aa15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 EP300Q09472 2414 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-210ENST00000551981 INPPL1O15357 1258 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 TEX28O15482 410 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 ASAP2O43150 1006 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 NARSO43776 548 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 GAS2O43903 313 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 ERLIN2O94905 339 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 DEXIO95424 95 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 CFHP08603 1231 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 ITGA4P13612 1032 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 HOXA11P31270 313 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 OR1G1P47890 313 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 AFF1P51825 1210 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 NPEPPSP55786 919 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 NCBP1Q09161 790 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 LAMTOR4Q0VGL1 99 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 PCBP1Q15365 356 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 UBXN11Q5T124 520 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms