RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 CKBP12277 381 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-207ENST00000550504 CRYBB1P53674 252 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-207ENST00000550504 MGAT3Q09327 533 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 MAPK6Q16659 721 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 C1orf53Q5VUE5 145 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 CENPPQ6IPU0 288 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 SRGAP1Q7Z6B7 1085 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-207ENST00000550504 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 TSG101Q99816 390 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 TARS2Q9BW92 718 aaKnown RBP11.29□□□□□ -0.6
RAB5C-207ENST00000550504 NFKBIZQ9BYH8 718 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 GBP3Q9H0R5 595 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 TMEM206Q9H813 350 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 CBX8Q9HC52 389 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-207ENST00000550504 RWDD2AQ9UIY3 292 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 SIP14410 1827 aa11.29□□□□□ -0.6
RAB5C-207ENST00000550504 BICDL2A1A5D9 508 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 ACKR2O00590 384 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CLIC2O15247 247 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CALUO43852 315 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CAND2O75155 1236 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 ERLIN2O94905 339 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 GHRP10912 638 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 SCP2P22307 547 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 EIF4BP23588 611 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 ABCD1P33897 745 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 LIG4P49917 911 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 BFSP2Q13515 415 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 PRPF4BQ13523 1007 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 TPD52L1Q16890 204 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CAGE1Q8TC20 777 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 FAM200AQ8TCP9 573 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 EEF2KMTQ96G04 330 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 CPB2Q96IY4 423 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 OSBPL7Q9BZF2 842 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 RBSNQ9H1K0 784 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 FZD8Q9H461 694 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 AGPAT3Q9NRZ7 376 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
RAB5C-207ENST00000550504 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
RAB5C-207ENST00000550504 SZT2Q5T011 3432 aa11.27□□□□□ -0.6
RAB5C-207ENST00000550504 BECN2A8MW95 431 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 PDXKO00764 312 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 TSPAN1O60635 241 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 CAVIN2O95810 425 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 CLTBP09497 229 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 SELPP16109 830 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 MATR3P43243 847 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 MYL5Q02045 173 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 LRRC63Q05C16 580 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 IQCB1Q15051 598 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 AMHR2Q16671 573 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ZCWPW2Q504Y3 356 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 FAM26DQ5JW98 314 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ATF7IP2Q5U623 682 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 PPP4R3CPQ6ZMV5 832 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 LRRC8DQ7L1W4 858 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 HS2ST1Q7LGA3 356 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 FAM228AQ86W67 206 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 CDR2LQ86X02 465 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 DHX40Q8IX18 779 aaKnown RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ENOX1Q8TC92 643 aaKnown RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 NOC3LQ8WTT2 800 aaKnown RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 KCNN1Q92952 543 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ACO2Q99798 780 aaKnown RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 HIPK3Q9H422 1215 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 PCIF1Q9H4Z3 704 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 PRDM5Q9NQX1 630 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-207ENST00000550504 TMEM39AQ9NV64 488 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 NFE2L3Q9Y4A8 694 aa11.27□□□□□ -0.61
RAB5C-207ENST00000550504 SMTNL1A8MU46 457 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms