RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PRKCEQ02156 737 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 KCNC3Q14003 757 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 LRCH2Q5VUJ6 765 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 TRMT1LQ7Z2T5 733 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 RBM23Q86U06 439 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 TRIM22Q8IYM9 498 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 ABI1Q8IZP0 508 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 FAM177A1Q8N128 213 aaPredicted RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 LRRC71Q8N4P6 559 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 RSPH1Q8WYR4 309 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 MRPS27Q92552 414 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 SLC5A5Q92911 643 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 RPGRIP1Q96KN7 1286 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 CASD1Q96PB1 797 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 SLC26A6Q9BXS9 759 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 KRTAP9-2Q9BYQ4 174 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 ADAMTS10Q9H324 1103 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 CWH43Q9H720 699 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 NGRNQ9NPE2 291 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 VPS54Q9P1Q0 977 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 PUF60Q9UHX1 559 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 USP15Q9Y4E8 981 aaPredicted RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 CYP3A7-CYP3A51PA0A087WV96 503 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 A0A0U1RQF3 1178 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 PER2O15055 1255 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 CHMP2AO43633 222 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 EDIL3O43854 480 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 PSMD10O75832 226 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 DARSP14868 501 aaKnown RBP8.58□□□□□ -1.04
NEK3-201ENST00000550331 CYP3A7P24462 503 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 NLRP5P59047 1200 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 ERVFC1P60507 584 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 CCT2P78371 535 aaKnown RBP8.58□□□□□ -1.04
NEK3-201ENST00000550331 KRT17Q04695 432 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 TARBP2Q15633 366 aaKnown RBP8.58□□□□□ -1.04
NEK3-201ENST00000550331 Q4G0T1 1027 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 MOXD1Q6UVY6 613 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 B3GNT9Q6UX72 402 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 LRRC55Q6ZSA7 311 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 RUFY3Q7L099 469 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 ASCL5Q7RTU5 278 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 ECHDC2Q86YB7 292 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 VN1R2Q8NFZ6 395 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 TBCKQ8TEA7 893 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 SUSD6Q92537 303 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 ASIC4Q96FT7 647 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 ZNF558Q96NG5 402 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 TCF25Q9BQ70 676 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 PHF7Q9BWX1 381 aaPredicted RBP8.58□□□□□ -1.04
NEK3-201ENST00000550331 TEKT3Q9BXF9 490 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 MRPL9Q9BYD2 267 aaKnown RBP8.58□□□□□ -1.04
NEK3-201ENST00000550331 NIFKQ9BYG3 293 aaKnown RBP8.58□□□□□ -1.04
NEK3-201ENST00000550331 UNC45AQ9H3U1 944 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 RNF19AQ9NV58 838 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 DACT1Q9NYF0 836 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 PCDHA4Q9UN74 947 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 DCHS1Q96JQ0 3298 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 GVINP1Q7Z2Y8 2422 aa8.58□□□□□ -1.04
NEK3-201ENST00000550331 IGKV6-21A0A0C4DH24 114 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 CARNS1A5YM72 827 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 PRR23AA6NEV1 266 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 PROB1E7EW31 1015 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 M0R2N6 131 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 DEXIO95424 95 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 EOMESO95936 686 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 HOXB8P17481 243 aaPredicted RBP8.57□□□□□ -1.04
NEK3-201ENST00000550331 SSRP1Q08945 709 aaKnown RBP8.57□□□□□ -1.04
NEK3-201ENST00000550331 UGCGQ16739 394 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 XKR3Q5GH77 459 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 CLLU1OSQ5K130 101 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 GALNT17Q6IS24 598 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 ANKRD54Q6NXT1 300 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 ERMP1Q7Z2K6 904 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 MIER3Q7Z3K6 550 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 DAGLBQ8NCG7 672 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 ZNF274Q96GC6 653 aaPredicted RBP8.57□□□□□ -1.04
NEK3-201ENST00000550331 MBOAT7Q96N66 472 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 SCLT1Q96NL6 688 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 NCOA5Q9HCD5 579 aaKnown RBP8.57□□□□□ -1.04
NEK3-201ENST00000550331 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 ENTPD7Q9NQZ7 604 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 CHST12Q9NRB3 414 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
NEK3-201ENST00000550331 VPS13AQ96RL7 3174 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 CACNA1BQ00975 2339 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 CPLX1O14810 134 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 STBD1O95210 358 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 PDGFBP01127 241 aaPredicted RBP8.56□□□□□ -1.04
NEK3-201ENST00000550331 SFPQP23246 707 aaKnown RBP eCLIP8.56□□□□□ -1.04
NEK3-201ENST00000550331 ID4P47928 161 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 DNM2P50570 870 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 RBM10P98175 930 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms