RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 EPHA7Q15375 998 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 XKR9Q5GH70 373 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 NOMO2Q5JPE7 1267 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 TMEM173Q86WV6 379 aaPredicted RBP14.94□□□□□ -0.02
NUP188-211ENST00000550219 TMEM87AQ8NBN3 555 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 AUTS2Q8WXX7 1259 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 AGPAT5Q9NUQ2 364 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 TBC1D13Q9NVG8 400 aa14.94□□□□□ -0.02
NUP188-211ENST00000550219 ARIH1Q9Y4X5 557 aaPredicted RBP14.94□□□□□ -0.02
NUP188-211ENST00000550219 TBX3O15119 743 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 RFC5P40937 340 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 GNL2Q13823 731 aaKnown RBP14.93□□□□□ -0.02
NUP188-211ENST00000550219 TPH2Q8IWU9 490 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 VPS52Q8N1B4 723 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 RNF149Q8NC42 400 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 URGCPQ8TCY9 931 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 PRPF31Q8WWY3 499 aaKnown RBP14.93□□□□□ -0.02
NUP188-211ENST00000550219 SUSD6Q92537 303 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 CASP10Q92851 521 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 CCDC43Q96MW1 224 aaKnown RBP14.93□□□□□ -0.02
NUP188-211ENST00000550219 DHX33Q9H6R0 707 aaKnown RBP14.93□□□□□ -0.02
NUP188-211ENST00000550219 NRDE2Q9H7Z3 1164 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 IFT122Q9HBG6 1241 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 PCDHB2Q9Y5E7 798 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 HCFC2Q9Y5Z7 792 aa14.93□□□□□ -0.02
NUP188-211ENST00000550219 C2orf71A6NGG8 1288 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 ZBTB39O15060 712 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 TRAPPC10P48553 1259 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 TOB1P50616 345 aaPredicted RBP14.92□□□□□ -0.02
NUP188-211ENST00000550219 SPIRE1Q08AE8 756 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 LAMTOR4Q0VGL1 99 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 KCNC3Q14003 757 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 BMS1Q14692 1282 aaKnown RBP14.92□□□□□ -0.02
NUP188-211ENST00000550219 SYCE2Q6PIF2 218 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 TMEM184AQ6ZMB5 413 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 OTUD6AQ7L8S5 288 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 ZBTB33Q86T24 672 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 C4orf19Q8IY42 314 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 SLFN12Q8IYM2 578 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 BCL7CQ8WUZ0 217 aaPredicted RBP14.92□□□□□ -0.02
NUP188-211ENST00000550219 EDAQ92838 391 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 PGBD4Q96DM1 585 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 MTRQ99707 1265 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 TRAIPQ9BWF2 469 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 ZBP1Q9H171 429 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 ZSWIM4Q9H7M6 989 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 MINDY3Q9H8M7 445 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 DNAJB4Q9UDY4 337 aa14.92□□□□□ -0.02
NUP188-211ENST00000550219 B4GALT3O60512 393 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 CLASP2O75122 1294 aaKnown RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 OFD1O75665 1012 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 ERLIN2O94905 339 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 CXCL14O95715 111 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 SLC11A1P49279 550 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 CALCRLQ16602 461 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 TPRNQ4KMQ1 711 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 RARS2Q5T160 578 aaKnown RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 SRGAP1Q7Z6B7 1085 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 EXOC8Q8IYI6 725 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 MRPL43Q8N983 215 aaKnown RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 TCP11Q8WWU5 503 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 IGSF21Q96ID5 467 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 EIF2AK1Q9BQI3 630 aaKnown RBP14.91□□□□□ -0.02
NUP188-211ENST00000550219 S1PR5Q9H228 398 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 RSAD1Q9HA92 442 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 PPME1Q9Y570 386 aa14.91□□□□□ -0.02
NUP188-211ENST00000550219 TMEM221A6NGB7 291 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 M0R296 226 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 WNT7AO00755 349 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 GAS2O43903 313 aaKnown RBP14.9□□□□□ -0.02
NUP188-211ENST00000550219 NEMFO60524 1076 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 SSBP05455 408 aaKnown RBP eCLIP14.9□□□□□ -0.02
NUP188-211ENST00000550219 GALTP07902 379 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 WEE2P0C1S8 567 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 HOXB8P17481 243 aaPredicted RBP14.9□□□□□ -0.02
NUP188-211ENST00000550219 ZXDAP98168 799 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 RILPL1Q5EBL4 403 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 CES5AQ6NT32 575 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 AGMOQ6ZNB7 445 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 TRIM67Q6ZTA4 783 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 RSPH1Q8WYR4 309 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 MFSD14AQ96MC6 490 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 FBXL18Q96ME1 805 aa14.9□□□□□ -0.02
NUP188-211ENST00000550219 FAM193BQ96PV7 902 aaPredicted RBP14.9□□□□□ -0.02
NUP188-211ENST00000550219 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 INO80B-WBP1J3KQ70 363 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 ZNF623O75123 536 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 POMCP01189 267 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 CTSAP10619 480 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 EPCAMP16422 314 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 ATP2B1P20020 1258 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 TXKP42681 527 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 AFF1P51825 1210 aaKnown RBP14.89□□□□□ -0.03
NUP188-211ENST00000550219 UBXN11Q5T124 520 aa14.89□□□□□ -0.03
NUP188-211ENST00000550219 ATL3Q6DD88 541 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms