RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 YME1L1Q96TA2 773 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 TRAIPQ9BWF2 469 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 TMEM134Q9H6X4 195 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 ELAC1Q9H777 363 aaKnown RBP24.84■■□□□ 1.57
BRF1-216ENST00000550208 KBTBD4Q9NVX7 518 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 TMEM161AQ9NX61 479 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 LARSQ9P2J5 1176 aaKnown RBP24.84■■□□□ 1.57
BRF1-216ENST00000550208 ARHGAP28Q9P2N2 729 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 SERTAD1Q9UHV2 236 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 KCNG1Q9UIX4 513 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 MYH11P35749 1972 aa24.84■■□□□ 1.57
BRF1-216ENST00000550208 ACKR2O00590 384 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 TBCAO75347 108 aaKnown RBP24.83■■□□□ 1.57
BRF1-216ENST00000550208 GATMP50440 423 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 SMTNP53814 917 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 NT5DC1Q5TFE4 455 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 Q7L0L9 218 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 TAS1R3Q7RTX0 852 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 ZNF598Q86UK7 904 aaKnown RBP24.83■■□□□ 1.57
BRF1-216ENST00000550208 FSIP1Q8NA03 581 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 RNF169Q8NCN4 708 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 ZNF689Q96CS4 500 aaPredicted RBP24.83■■□□□ 1.57
BRF1-216ENST00000550208 PRIMPOLQ96LW4 560 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 TTYH1Q9H313 450 aaPredicted RBP24.83■■□□□ 1.57
BRF1-216ENST00000550208 SEMA6BQ9H3T3 888 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 SLC28A3Q9HAS3 691 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 PARVGQ9HBI0 331 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 FAM105AQ9NUU6 356 aa24.83■■□□□ 1.57
BRF1-216ENST00000550208 FAM237AA0A1B0GTK4 181 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 A0A1B0GUA9 196 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 ATF7P17544 494 aaPredicted RBP24.82■■□□□ 1.56
BRF1-216ENST00000550208 NDUFA8P51970 172 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 TAP1Q03518 808 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 PRPF4BQ13523 1007 aaKnown RBP24.82■■□□□ 1.56
BRF1-216ENST00000550208 NOTUMQ6P988 496 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 TMEM161BQ8NDZ6 487 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 SP7Q8TDD2 431 aaPredicted RBP24.82■■□□□ 1.56
BRF1-216ENST00000550208 EIF2AQ9BY44 585 aaKnown RBP24.82■■□□□ 1.56
BRF1-216ENST00000550208 TNMDQ9H2S6 317 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 GOLPH3LQ9H4A5 285 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 ZNF576Q9H609 170 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 RC3H2Q9HBD1 1191 aaKnown RBP24.82■■□□□ 1.56
BRF1-216ENST00000550208 RNF19AQ9NV58 838 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 RNF216Q9NWF9 866 aaPredicted RBP24.82■■□□□ 1.56
BRF1-216ENST00000550208 PCDHB2Q9Y5E7 798 aa24.82■■□□□ 1.56
BRF1-216ENST00000550208 TRAK2O60296 914 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 ZNF623O75123 536 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 EOMESO95936 686 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 FGFR1P11362 822 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 LONRF3Q496Y0 759 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 ZNF697Q5TEC3 545 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 PPP2R2DQ66LE6 453 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 MRPS27Q92552 414 aaKnown RBP24.81■■□□□ 1.56
BRF1-216ENST00000550208 LPPQ93052 612 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 FAM161BQ96MY7 647 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 PYM1Q9BRP8 204 aaKnown RBP24.81■■□□□ 1.56
BRF1-216ENST00000550208 LRRC27Q9C0I9 530 aa24.81■■□□□ 1.56
BRF1-216ENST00000550208 LAMA2P24043 3122 aaKnown RBP24.81■■□□□ 1.56
BRF1-216ENST00000550208 LINC01553A4QN01 128 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 MAPTP10636 758 aaKnown RBP24.8■■□□□ 1.56
BRF1-216ENST00000550208 SKIP12755 728 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 IDEP14735 1019 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 SYKP43405 635 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 NCKAP1LP55160 1127 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 AMPD3Q01432 767 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 HAUS6Q7Z4H7 955 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 SPRED2Q7Z698 418 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 MRPL10Q7Z7H8 261 aaKnown RBP24.8■■□□□ 1.56
BRF1-216ENST00000550208 CCDC51Q96ER9 411 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 FIZ1Q96SL8 496 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 LAMA3Q16787 3333 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 CNTNAP2Q9UHC6 1331 aa24.8■■□□□ 1.56
BRF1-216ENST00000550208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.79■■□□□ 1.56
BRF1-216ENST00000550208 MEIS3P2A8K0S8 358 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 ACTN4O43707 911 aaKnown RBP24.79■■□□□ 1.56
BRF1-216ENST00000550208 SLFN14P0C7P3 912 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 CASP1P29466 404 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 NMT1P30419 496 aaKnown RBP24.79■■□□□ 1.56
BRF1-216ENST00000550208 AFMP43652 599 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 RAB27AP51159 221 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 BTG3Q14201 252 aaPredicted RBP24.79■■□□□ 1.56
BRF1-216ENST00000550208 TMEM132AQ24JP5 1023 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 PAN2Q504Q3 1202 aaKnown RBP24.79■■□□□ 1.56
BRF1-216ENST00000550208 EEF1DP3Q658K8 133 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 SFR1Q86XK3 245 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 GRAMD1CQ8IYS0 662 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 CEP57L1Q8IYX8 460 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 DEFB123Q8N688 67 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 SMG8Q8ND04 991 aaKnown RBP24.79■■□□□ 1.56
BRF1-216ENST00000550208 C7orf25Q9BPX7 421 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 TRIM9Q9C026 710 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 PDZD7Q9H5P4 517 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 CERS4Q9HA82 394 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 MAGEF1Q9HAY2 307 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 PHLPP2Q6ZVD8 1323 aa24.79■■□□□ 1.56
BRF1-216ENST00000550208 TMEM265A0A087WTH1 108 aa24.78■■□□□ 1.56
BRF1-216ENST00000550208 GOLGA6L4A6NEF3 574 aa24.78■■□□□ 1.56
BRF1-216ENST00000550208 TBKBP1A7MCY6 615 aa24.78■■□□□ 1.56
BRF1-216ENST00000550208 NPTXRO95502 500 aa24.78■■□□□ 1.56
BRF1-216ENST00000550208 SLC27A1Q6PCB7 646 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms