RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 OLFML1Q6UWY5 402 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 SYNPOQ8N3V7 929 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 PPP1R14CQ8TAE6 165 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 PDCD2LQ9BRP1 358 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 MTFR1LQ9H019 292 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 MTG2Q9H4K7 406 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 PTGFRNQ9P2B2 879 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 SPO11Q9Y5K1 396 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 CD2APQ9Y5K6 639 aa6.18□□□□□ -1.42
CCDC38-208ENST00000549876 CENPVL1A0A0U1RR11 272 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 OPHN1O60890 802 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 RECQL4O94761 1208 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 SCAF4O95104 1147 aaKnown RBP6.17□□□□□ -1.42
CCDC38-208ENST00000549876 CFBP00751 764 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 GAAP10253 952 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 ATP2A2P16615 1042 aaKnown RBP6.17□□□□□ -1.42
CCDC38-208ENST00000549876 MRPS21P82921 87 aaKnown RBP6.17□□□□□ -1.42
CCDC38-208ENST00000549876 TAP1Q03518 808 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 TCEA2Q15560 299 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 MAN2A1Q16706 1144 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 TKFCQ3LXA3 575 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 BEND2Q8NDZ0 799 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 MYEOVQ96EZ4 313 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 UIMC1Q96RL1 719 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 KCNH6Q9H252 994 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 OXSMQ9NWU1 459 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 ING3Q9NXR8 418 aa6.17□□□□□ -1.42
CCDC38-208ENST00000549876 H2AFY2Q9P0M6 372 aaPredicted RBP6.17□□□□□ -1.42
CCDC38-208ENST00000549876 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
CCDC38-208ENST00000549876 FSBPO95073 299 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 LAG3P18627 525 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 POU3F2P20265 443 aaPredicted RBP6.16□□□□□ -1.42
CCDC38-208ENST00000549876 C21orf58P58505 322 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 KIAA1841Q6NSI8 718 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 UNQ6494/PRO21346Q6UXR6 183 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 PHYKPLQ8IUZ5 450 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 NXPE1Q8N323 547 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 OR52N2Q8NGI0 321 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 CPPED1Q9BRF8 314 aaPredicted RBP6.16□□□□□ -1.42
CCDC38-208ENST00000549876 MYL10Q9BUA6 226 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 SLC46A2Q9BY10 475 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 CPEB1Q9BZB8 566 aaKnown RBP6.16□□□□□ -1.42
CCDC38-208ENST00000549876 WDR26Q9H7D7 661 aa6.16□□□□□ -1.42
CCDC38-208ENST00000549876 MASP2O00187 686 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 MAFGO15525 162 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 F2P00734 622 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 GYPEP15421 78 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 FAM189BP81408 668 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 VPS72Q15906 364 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 COLEC12Q5KU26 742 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 Q6YL49 198 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 ADGRG3Q86Y34 549 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 KIF18BQ86Y91 864 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 HOMER1Q86YM7 354 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 UNC5BQ8IZJ1 945 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 PIK3C3Q8NEB9 887 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 NINJ1Q92982 152 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 FANCLQ9NW38 375 aa6.15□□□□□ -1.42
CCDC38-208ENST00000549876 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCDC38-208ENST00000549876 TMEM200CA6NKL6 621 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 ZNF891A8MT65 544 aaPredicted RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 NRP1O14786 923 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 KPNA6O60684 536 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 LPXNO60711 386 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 ZEB1P37275 1124 aaPredicted RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 CLK3P49761 638 aaKnown RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 DSG1Q02413 1049 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 IQSEC1Q6DN90 963 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 TIGD7Q6NT04 549 aaPredicted RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 SYCE2Q6PIF2 218 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 C16orf86Q6ZW13 317 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 LRRTM3Q86VH5 581 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 LILRA3Q8N6C8 439 aaPredicted RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 C7orf31Q8N865 590 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 RTF1Q92541 710 aaKnown RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 APPBP2Q92624 585 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 NOL10Q9BSC4 688 aaKnown RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 NDC1Q9BTX1 674 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 LSM14BQ9BX40 385 aaKnown RBP6.14□□□□□ -1.43
CCDC38-208ENST00000549876 ZMAT4Q9H898 229 aa6.14□□□□□ -1.43
CCDC38-208ENST00000549876 DNAJC6O75061 913 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 ALDH1A2O94788 518 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 MRPL49Q13405 166 aaKnown RBP6.13□□□□□ -1.43
CCDC38-208ENST00000549876 PCBP1Q15365 356 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC38-208ENST00000549876 FAM83AQ86UY5 434 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 GLB1L3Q8NCI6 653 aaPredicted RBP6.13□□□□□ -1.43
CCDC38-208ENST00000549876 CHTF18Q8WVB6 975 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 HIST1H2AHQ96KK5 128 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 FAM193BQ96PV7 902 aaPredicted RBP6.13□□□□□ -1.43
CCDC38-208ENST00000549876 HIST1H2AJQ99878 128 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 POFUT1Q9H488 388 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 SERHL2Q9H4I8 314 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 CYP4F11Q9HBI6 524 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 TOMM22Q9NS69 142 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 EIF2B4Q9UI10 523 aaKnown RBP6.13□□□□□ -1.43
CCDC38-208ENST00000549876 ZKSCAN5Q9Y2L8 839 aa6.13□□□□□ -1.43
CCDC38-208ENST00000549876 KIAA0355O15063 1070 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 TGM5O43548 720 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms