RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 GCNT4Q9P109 453 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 FBXL5Q9UKA1 691 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
LINC00661-204ENST00000549354 MYZAPP0CAP1 466 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 ARP10275 920 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 CDK17Q00537 523 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 EPHA7Q15375 998 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 PTGISQ16647 500 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 QPCTQ16769 361 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 CCDC114Q96M63 670 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 BRCA2P51587 3418 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 DHX15O43143 795 aaKnown RBP12□□□□□ -0.49
LINC00661-204ENST00000549354 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
LINC00661-204ENST00000549354 HNRNPH3P31942 346 aaKnown RBP12□□□□□ -0.49
LINC00661-204ENST00000549354 MDH1P40925 334 aaKnown RBP12□□□□□ -0.49
LINC00661-204ENST00000549354 PLTPP55058 493 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 SNX1Q13596 522 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 NAB2Q15742 525 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 SLC18A3Q16572 532 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 KRT71Q3SY84 523 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 ZNF662Q6ZS27 426 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 CTNNBL1Q8WYA6 563 aaPredicted RBP12□□□□□ -0.49
LINC00661-204ENST00000549354 RUSC1Q9BVN2 902 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 EPN3Q9H201 632 aa12□□□□□ -0.49
LINC00661-204ENST00000549354 AKAP3O75969 853 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 DDNO94850 711 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 ALAS1P13196 640 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 KCNJ1P48048 391 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 B4GALNT4Q76KP1 1039 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 EPM2AIP1Q7L775 607 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 PALB2Q86YC2 1186 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 USP38Q8NB14 1042 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 BANK1Q8NDB2 785 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 NEK9Q8TD19 979 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 ATG4CQ96DT6 458 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 ZNF577Q9BSK1 485 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 GDF3Q9NR23 364 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 CEP72Q9P209 647 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 SNX24Q9Y343 169 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 COL11A1P12107 1806 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 FGGP02679 453 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 MAGOHP61326 146 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 TNNC1P63316 161 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 MRPS9P82933 396 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 TKFCQ3LXA3 575 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 UBAP2Q5T6F2 1119 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 MAGOHBQ96A72 148 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 UNC45AQ9H3U1 944 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 PLCB1Q9NQ66 1216 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 TAS2R14Q9NYV8 317 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 ZNF214Q9UL59 606 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 SNCAIPQ9Y6H5 919 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 GAS7O60861 476 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 PRLRP16471 622 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 MEI1Q5TIA1 1274 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 METTL13Q8N6R0 699 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 ZSWIM2Q8NEG5 633 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 CAVIN3Q969G5 261 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 WNK4Q96J92 1243 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 CABS1Q96KC9 395 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 TEKT3Q9BXF9 490 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 KCTD10Q9H3F6 313 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 KCND2Q9NZV8 630 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.99□□□□□ -0.49
LINC00661-204ENST00000549354 A0A0G2JMZ2 1700 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 LOXHD1Q8IVV2 1947 aa11.99□□□□□ -0.49
LINC00661-204ENST00000549354 FAM13AO94988 1023 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 YY1P25490 414 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 HMGCS2P54868 508 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 MARSP56192 900 aaKnown RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 RPS6P62753 249 aaKnown RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 LRRC14Q15048 493 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 PGM5Q15124 567 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 BMT2Q1RMZ1 405 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 AGO4Q9HCK5 861 aaKnown RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 KCNH7Q9NS40 1196 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 CNOT8Q9UFF9 292 aaKnown RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 NOC2LQ9Y3T9 749 aaKnown RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 OTOFQ9HC10 1997 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 NF2P35240 595 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 SOX10P56693 466 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 UAP1Q16222 522 aaPredicted RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 C1orf186Q6ZWK4 172 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 CPLX4Q7Z7G2 160 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 TAAR1Q96RJ0 339 aa11.98□□□□□ -0.49
LINC00661-204ENST00000549354 TAF1DQ9H5J8 278 aaPredicted RBP11.98□□□□□ -0.49
LINC00661-204ENST00000549354 PTPRFP10586 1907 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms