RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 NETO1Q8TDF5 533 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 USP6NLQ92738 828 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 KCNB2Q92953 911 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 RRP36Q96EU6 259 aaKnown RBP6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 DEFB118Q96PH6 123 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 NCOA5Q9HCD5 579 aaKnown RBP6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 A1CFQ9NQ94 594 aaKnown RBP6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 FBXO40Q9UH90 709 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 ZHX1Q9UKY1 873 aaPredicted RBP6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 SLC5A6Q9Y289 635 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 PCDHA1Q9Y5I3 950 aa6.77□□□□□ -1.33
EFCAB2-215ENST00000549220 PFASO15067 1338 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 ABCB11O95342 1321 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 WDR19Q8NEZ3 1342 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 ATP2A1O14983 1001 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 ZBTB5O15062 677 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 CYTH3O43739 400 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 EIF5BO60841 1220 aaKnown RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 PPP1R11O60927 126 aaPredicted RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 TFRCP02786 760 aaKnown RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 EN2P19622 333 aaPredicted RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 HOXA13P31271 388 aaPredicted RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 GNAQP50148 359 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 NEK4P51957 841 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 TKFCQ3LXA3 575 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 CYP27C1Q4G0S4 372 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 RNF207Q6ZRF8 634 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 HEATR3Q7Z4Q2 680 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 SRBD1Q8N5C6 995 aaKnown RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 TBC1D5Q92609 795 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 ARMC5Q96C12 935 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 AMNQ9BXJ7 453 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 C22orf23Q9BZE7 217 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.76□□□□□ -1.337e-7■■■□□ 15.6
EFCAB2-215ENST00000549220 UPF2Q9HAU5 1272 aaKnown RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 CYP39A1Q9NYL5 469 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 PCOLCE2Q9UKZ9 415 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 BRCA2P51587 3418 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 RPTORQ8N122 1335 aa6.76□□□□□ -1.33
EFCAB2-215ENST00000549220 DNAH12Q6ZR08 3092 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 CPLX1O14810 134 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 RNASE1P07998 156 aaKnown RBP6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 AK2P54819 239 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 RPS6P62753 249 aaKnown RBP6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 PLCB3Q01970 1234 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 AKAP17AQ02040 695 aaKnown RBP6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 TMTC3Q6ZXV5 915 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 ARMCX2Q7L311 632 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 SGMS1Q86VZ5 419 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 FBXO16Q8IX29 292 aaPredicted RBP6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 ABRAQ8N0Z2 381 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 TRPV1Q8NER1 839 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 CLEC4DQ8WXI8 215 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 PHKBQ93100 1093 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 TINF2Q9BSI4 451 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 SPZ1Q9BXG8 430 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 SLC26A6Q9BXS9 759 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 RIOX1Q9H6W3 641 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 RBM28Q9NW13 759 aaKnown RBP6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 VAV3Q9UKW4 847 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 CNPY2Q9Y2B0 182 aa6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 MRPL11Q9Y3B7 192 aaKnown RBP6.75□□□□□ -1.33
EFCAB2-215ENST00000549220 SCN5AQ14524 2016 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 DNAJC25-GNG10A0A024R161 153 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 EPB41L2O43491 1005 aaKnown RBP6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 SORBS3O60504 671 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 MYCLP12524 364 aaPredicted RBP6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 CYBAP13498 195 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 PTGS1P23219 599 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 PDIA3P30101 505 aaKnown RBP6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 ALDH5A1P51649 535 aaPredicted RBP6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 NAPAP54920 295 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 ANAPC15P60006 121 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 PRKCQQ04759 706 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 PPP2R3AQ06190 1150 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 UBE2SQ16763 222 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 ARHGEF16Q5VV41 709 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 MCF2L2Q86YR7 1114 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 NECAB1Q8N987 351 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 FAM133AQ8N9E0 248 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 SMARCC2Q8TAQ2 1214 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 U2AF1L4Q8WU68 220 aaKnown RBP6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 MISP3Q96FF7 219 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 FGD4Q96M96 766 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 TAAR1Q96RJ0 339 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 MAP3K14Q99558 947 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 LZTS2Q9BRK4 669 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 TM6SF1Q9BZW5 370 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 SLKQ9H2G2 1235 aaPredicted RBP6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 ASTN1O14525 1302 aa6.74□□□□□ -1.33
EFCAB2-215ENST00000549220 GBF1Q92538 1859 aa6.73□□□□□ -1.33
EFCAB2-215ENST00000549220 CCDC196A0A1B0GTZ2 297 aa6.73□□□□□ -1.33
EFCAB2-215ENST00000549220 ASB14A6NK59 587 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms