RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ZBTB33Q86T24 672 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 EXOC8Q8IYI6 725 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 ERMNQ8TAM6 284 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 TCF25Q9BQ70 676 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 JPH2Q9BR39 696 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 POLR3CQ9BUI4 534 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 SMOC2Q9H3U7 446 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 TUFT1Q9NNX1 390 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 CYP26B1Q9NR63 512 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 STK24Q9Y6E0 443 aa17.52■□□□□ 0.4
CHMP1A-206ENST00000549139 C2CD4DB7Z1M9 353 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 SPATA31C1P0DKV0 1188 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 FGFR1P11362 822 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 LAG3P18627 525 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 MUTP22033 750 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 RPA1P27694 616 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 CACNA1BQ00975 2339 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 LLGL2Q6P1M3 1020 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 DTHD1Q6ZMT9 781 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 LRRC55Q6ZSA7 311 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 CATSPER3Q86XQ3 398 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 CEP170P1Q96L14 293 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 MAP7D2Q96T17 732 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 SH2D3AQ9BRG2 576 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 RAB34Q9BZG1 259 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 POMKQ9H5K3 350 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 ANKEF1Q9NU02 776 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 TMEM161AQ9NX61 479 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 LRWD1Q9UFC0 647 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 MTMR6Q9Y217 621 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 NR2E1Q9Y466 385 aa17.51■□□□□ 0.39
CHMP1A-206ENST00000549139 DENND3A2RUS2 1198 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 ZBTB39O15060 712 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 GPR32O75388 356 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 DNM2P50570 870 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 CLCN3P51790 818 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 NPEPPSP55786 919 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 DSC3Q14574 896 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 ARL6IP4Q66PJ3 421 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 PLA2G4FQ68DD2 849 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 ERMP1Q7Z2K6 904 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 LRRC71Q8N4P6 559 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 ADAM7Q9H2U9 754 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 DHX33Q9H6R0 707 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 ELAC1Q9H777 363 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 RNF19AQ9NV58 838 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 DMXL1Q9Y485 3027 aa17.5■□□□□ 0.39
CHMP1A-206ENST00000549139 OTOGLQ3ZCN5 2332 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 MED24O75448 989 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 BMP15O95972 392 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 VTNP04004 478 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 RFC5P40937 340 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 CRYBB1P53674 252 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 RESTQ13127 1097 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 IL17AQ16552 155 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 XKR9Q5GH70 373 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 HAUS3Q68CZ6 603 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 KCNT2Q6UVM3 1135 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 FAM228AQ86W67 206 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 ZNF579Q8NAF0 562 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 CASP10Q92851 521 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 CASD1Q96PB1 797 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 ATP6V0A4Q9HBG4 840 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 ENTPD7Q9NQZ7 604 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 AKT3Q9Y243 479 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 HCFC2Q9Y5Z7 792 aa17.49■□□□□ 0.39
CHMP1A-206ENST00000549139 GPR182O15218 404 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 NLRP11P59045 1033 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 ITIH3Q06033 890 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 ASTLQ6HA08 431 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 FRMD5Q7Z6J6 570 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 SLC7A3Q8WY07 619 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 NACC1Q96RE7 527 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 TMEM117Q9H0C3 514 aa17.48■□□□□ 0.39
CHMP1A-206ENST00000549139 GAS2O43903 313 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 PBX3P40426 434 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 RARRES1P49788 294 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 GPC3P51654 580 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 POLGP54098 1239 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 DRP2Q13474 957 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 KIZQ2M2Z5 673 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 ZDHHC14Q8IZN3 488 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 MRPL43Q8N983 215 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 NKD2Q969F2 451 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 ADAMTS10Q9H324 1103 aa17.47■□□□□ 0.39
CHMP1A-206ENST00000549139 DBR1Q9UK59 544 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms