RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 CEP152O94986 1710 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 H7C1D1 291 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 CYP17A1P05093 508 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 TPM2P07951 284 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 HHEXQ03014 270 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 HGFACQ04756 655 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 MVPQ14764 893 aaKnown RBP6.48□□□□□ -1.37
UBE2N-202ENST00000548946 ZNF174Q15697 407 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
UBE2N-202ENST00000548946 Q6ZSN1 163 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 UBE2R2Q712K3 238 aaPredicted RBP6.48□□□□□ -1.37
UBE2N-202ENST00000548946 TCP11L2Q8N4U5 519 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 SORCS2Q96PQ0 1159 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 SAE1Q9UBE0 346 aaPredicted RBP6.48□□□□□ -1.37
UBE2N-202ENST00000548946 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
UBE2N-202ENST00000548946 SHPRHQ149N8 1683 aa6.48□□□□□ -1.37
UBE2N-202ENST00000548946 SBNO2Q9Y2G9 1366 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 ARHGAP5Q13017 1502 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.47□□□□□ -1.37
UBE2N-202ENST00000548946 PTPDC1A2A3K4 754 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 SLC26A4O43511 780 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 H2AFYO75367 372 aaKnown RBP6.47□□□□□ -1.37
UBE2N-202ENST00000548946 ACVRL1P37023 503 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 SLC6A3Q01959 620 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 FOXE3Q13461 319 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 GRM7Q14831 915 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 KLHDC10Q6PID8 442 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 MAMDC4Q6UXC1 1216 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 RNF207Q6ZRF8 634 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 GAS2L3Q86XJ1 694 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 NME9Q86XW9 330 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 SHCBP1Q8NEM2 672 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 SH3TC2Q8TF17 1288 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
UBE2N-202ENST00000548946 MAML3Q96JK9 1138 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 PPP1R9BQ96SB3 815 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 SCAND2PQ9GZW5 306 aaPredicted RBP6.47□□□□□ -1.37
UBE2N-202ENST00000548946 CLTCL1P53675 1640 aa6.47□□□□□ -1.37
UBE2N-202ENST00000548946 DNAJC8O75937 253 aaPredicted RBP6.46□□□□□ -1.38
UBE2N-202ENST00000548946 PRLP01236 227 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 CT47B1P0C2W7 299 aaPredicted RBP6.46□□□□□ -1.38
UBE2N-202ENST00000548946 MSX2P35548 267 aaPredicted RBP6.46□□□□□ -1.38
UBE2N-202ENST00000548946 FOXL1Q12952 345 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 ADAM15Q13444 863 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 TTC38Q5R3I4 469 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 PIK3R6Q5UE93 754 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 ZKSCAN2Q63HK3 967 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 ADGRE4PQ86SQ3 457 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 HSCBQ8IWL3 235 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 TNPO1Q92973 898 aaKnown RBP6.46□□□□□ -1.38
UBE2N-202ENST00000548946 DRC1Q96MC2 740 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 MYH16Q9H6N6 1097 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 RRP7AQ9Y3A4 280 aaKnown RBP6.46□□□□□ -1.38
UBE2N-202ENST00000548946 MYOM2P54296 1465 aa6.46□□□□□ -1.38
UBE2N-202ENST00000548946 ARHGAP31Q2M1Z3 1444 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 UBA6A0AVT1 1052 aaPredicted RBP6.45□□□□□ -1.38
UBE2N-202ENST00000548946 TRAF5O00463 557 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 DVL2O14641 736 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 JMJD7P0C870 316 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 PTMSP20962 102 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 HIBADHP31937 336 aaKnown RBP6.45□□□□□ -1.38
UBE2N-202ENST00000548946 ZNF460Q14592 562 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 DGKDQ16760 1214 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 SLFN12LQ6IEE8 588 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 CLEC17AQ6ZS10 378 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 MORC1Q86VD1 984 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 GPR135Q8IZ08 494 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 BCL6BQ8N143 479 aaPredicted RBP6.45□□□□□ -1.38
UBE2N-202ENST00000548946 SYNPOQ8N3V7 929 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 KIAA1958Q8N8K9 716 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 EXTL1Q92935 676 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 B4GALT6Q9UBX8 382 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 DENND2AQ9ULE3 1009 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 CTDP1Q9Y5B0 961 aaPredicted RBP6.45□□□□□ -1.38
UBE2N-202ENST00000548946 HS3ST3A1Q9Y663 406 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 SHROOM2Q13796 1616 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 ZNF518AQ6AHZ1 1483 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 NRXN1Q9ULB1 1477 aa6.45□□□□□ -1.38
UBE2N-202ENST00000548946 VWDEQ8N2E2 1590 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 PLCH2O75038 1416 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 NSD3Q9BZ95 1437 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 TRAPPC8Q9Y2L5 1435 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 MYO3AQ8NEV4 1616 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 PPP1R12AO14974 1030 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-202ENST00000548946 RFPL3O75679 317 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 ASMTLO95671 621 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 HMGA2P52926 109 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 CFAP100Q494V2 611 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 MIIPQ5JXC2 388 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 CDCA2Q69YH5 1023 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-202ENST00000548946 SGMS1Q86VZ5 419 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 C1orf210Q8IVY1 113 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 ZFPM1Q8IX07 1006 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 D2HGDHQ8N465 521 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 ZNF808Q8N4W9 903 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-202ENST00000548946 UBXN4Q92575 508 aa6.44□□□□□ -1.38
UBE2N-202ENST00000548946 RABGGTAQ92696 567 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms