RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 DMAC2Q9NW81 257 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 TPX2Q9ULW0 747 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 PHF2O75151 1096 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 TRIM37O94972 964 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 COMTP21964 271 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 KCNJ1P48048 391 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 BFSP1Q12934 665 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 ARMC9Q7Z3E5 817 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 MKNK1Q9BUB5 465 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 DBR1Q9UK59 544 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 E2F5Q15329 346 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 LACTB2Q53H82 288 aaPredicted RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC137Q6PK04 289 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC25Q86WR0 208 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 RPUSD2Q8IZ73 545 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC197Q8NCU1 140 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PGM2Q96G03 612 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 POP1Q99575 1024 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 ELAC2Q9BQ52 826 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CXorf56Q9H5V9 222 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 A1CFQ9NQ94 594 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PI4KBQ9UBF8 816 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 RASAL2Q9UJF2 1139 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 MYH11P35749 1972 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCT8L1PA6NM43 557 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC169A6NNP5 214 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PSMD10O75832 226 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PYGMP11217 842 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 BMP3P12645 472 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 MMP14P50281 582 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CENPTQ96BT3 561 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 ZSWIM1Q9BR11 485 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 A0A1W2PRG0 241 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 GH2P01242 217 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 VIMP08670 466 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC172P0C7W6 258 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 GCLMP48507 274 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PPP3CAQ08209 521 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 TBC1D10BQ4KMP7 808 aaPredicted RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 SPDYCQ5MJ68 293 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 UBL4BQ8N7F7 174 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PCDHB18PQ96TA0 734 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 KDM4CQ9H3R0 1056 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 TUFT1Q9NNX1 390 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 INTS9Q9NV88 658 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 GGT7Q9UJ14 662 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 PCDHA3Q9Y5H8 950 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
RAPGEF3-218ENST00000548919 GAS7O60861 476 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 CYP3A4P08684 503 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 PPP2R5EQ16537 467 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 NFIL3Q16649 462 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC174Q6PII3 467 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 RHOT2Q8IXI1 618 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 LY75O60449 1722 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 QSER1Q2KHR3 1735 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 FOXO6A8MYZ6 492 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 POLRMTO00411 1230 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 SGPL1O95470 568 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 CHRNA3P32297 505 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 PEX5P50542 639 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 XRCC4Q13426 336 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 LRRC14Q15048 493 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 PPP2R5AQ15172 486 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 TMEM179Q6ZVK1 233 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC105Q8IYK2 499 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 PKD2L1Q9P0L9 805 aa15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF3-218ENST00000548919 HIP1RO75146 1068 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 ARP10275 920 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 CTNNA2P26232 953 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 PRELPP51888 382 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 ZNF131P52739 623 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 DRG2P55039 364 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 PREPLQ4J6C6 727 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 FAM133BQ5BKY9 247 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 TATDN1Q6P1N9 297 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 DAW1Q8N136 415 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 MGARPQ8TDB4 240 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 SH2D3AQ9BRG2 576 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 UNC45AQ9H3U1 944 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 PCYOX1Q9UHG3 505 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 CD2APQ9Y5K6 639 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms