RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 CPB2Q96IY4 423 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 RSAD1Q9HA92 442 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
TROAP-207ENST00000548311 TSPAN1O60635 241 aa17■□□□□ 0.31
TROAP-207ENST00000548311 MED24O75448 989 aa17■□□□□ 0.31
TROAP-207ENST00000548311 EYA4O95677 639 aa17■□□□□ 0.31
TROAP-207ENST00000548311 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
TROAP-207ENST00000548311 CAPSQ13938 189 aa17■□□□□ 0.31
TROAP-207ENST00000548311 NBR1Q14596 966 aa17■□□□□ 0.31
TROAP-207ENST00000548311 BMS1Q14692 1282 aaKnown RBP17■□□□□ 0.31
TROAP-207ENST00000548311 RABEP1Q15276 862 aa17■□□□□ 0.31
TROAP-207ENST00000548311 UBXN11Q5T124 520 aa17■□□□□ 0.31
TROAP-207ENST00000548311 AGMOQ6ZNB7 445 aa17■□□□□ 0.31
TROAP-207ENST00000548311 TMEM173Q86WV6 379 aaPredicted RBP17■□□□□ 0.31
TROAP-207ENST00000548311 CATSPER3Q86XQ3 398 aa17■□□□□ 0.31
TROAP-207ENST00000548311 TMEM87AQ8NBN3 555 aa17■□□□□ 0.31
TROAP-207ENST00000548311 LRFN3Q9BTN0 628 aa17■□□□□ 0.31
TROAP-207ENST00000548311 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
TROAP-207ENST00000548311 USP15Q9Y4E8 981 aaPredicted RBP17■□□□□ 0.31
TROAP-207ENST00000548311 C19orf67A6NJJ6 358 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 ST18O60284 1047 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 ITGA4P13612 1032 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 ALADP13716 330 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 GLRA2P23416 452 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 ARL2P36404 184 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 MBTD1Q05BQ5 628 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 ORC2Q13416 577 aaPredicted RBP16.99■□□□□ 0.31
TROAP-207ENST00000548311 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 FAM193BQ96PV7 902 aaPredicted RBP16.99■□□□□ 0.31
TROAP-207ENST00000548311 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 APOL6Q9BWW8 343 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 APOL5Q9BWW9 433 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
TROAP-207ENST00000548311 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 DNAJB4Q9UDY4 337 aa16.99■□□□□ 0.31
TROAP-207ENST00000548311 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.98■□□□□ 0.31
TROAP-207ENST00000548311 LRRIQ4A6NIV6 560 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 DCXO43602 365 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 CXCL14O95715 111 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 POMCP01189 267 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 GALTP07902 379 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 XRCC6P12956 609 aaKnown RBP eCLIP16.98■□□□□ 0.31
TROAP-207ENST00000548311 AXLP30530 894 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 SLC11A1P49279 550 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 PCBP1Q15365 356 aaKnown RBP eCLIP16.98■□□□□ 0.31
TROAP-207ENST00000548311 MRPL10Q7Z7H8 261 aaKnown RBP16.98■□□□□ 0.31
TROAP-207ENST00000548311 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 MRPL43Q8N983 215 aaKnown RBP16.98■□□□□ 0.31
TROAP-207ENST00000548311 AUTS2Q8WXX7 1259 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 IGSF21Q96ID5 467 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
TROAP-207ENST00000548311 TRIM6Q9C030 488 aaPredicted RBP16.98■□□□□ 0.31
TROAP-207ENST00000548311 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
TROAP-207ENST00000548311 IPPQ9Y573 584 aa16.98■□□□□ 0.31
TROAP-207ENST00000548311 ARHGEF35A5YM69 484 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 CARNS1A5YM72 827 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 C2orf71A6NGG8 1288 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 B4GALT3O60512 393 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 NCLP19338 710 aaKnown RBP16.97■□□□□ 0.31
TROAP-207ENST00000548311 TRAPPC10P48553 1259 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 AFF1P51825 1210 aaKnown RBP16.97■□□□□ 0.31
TROAP-207ENST00000548311 POU5F1BQ06416 359 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 ANKRD54Q6NXT1 300 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 SMG8Q8ND04 991 aaKnown RBP16.97■□□□□ 0.31
TROAP-207ENST00000548311 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 MCPH1Q8NEM0 835 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 BCL7CQ8WUZ0 217 aaPredicted RBP16.97■□□□□ 0.31
TROAP-207ENST00000548311 CCDC51Q96ER9 411 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 CSRNP2Q9H175 543 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 C11orf16Q9NQ32 467 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 KANSL3Q9P2N6 904 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 DBR1Q9UK59 544 aaKnown RBP16.97■□□□□ 0.31
TROAP-207ENST00000548311 KIF3AQ9Y496 699 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 HES2Q9Y543 173 aa16.97■□□□□ 0.31
TROAP-207ENST00000548311 B4GALT5O43286 388 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 GPR37L1O60883 481 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 DDHD2O94830 711 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 ARF4P18085 180 aaPredicted RBP16.96■□□□□ 0.31
TROAP-207ENST00000548311 RPA1P27694 616 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 CCT6AP40227 531 aaKnown RBP16.96■□□□□ 0.31
TROAP-207ENST00000548311 MLH1P40692 756 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 DDX53Q86TM3 631 aaKnown RBP16.96■□□□□ 0.31
TROAP-207ENST00000548311 CDR2LQ86X02 465 aaPredicted RBP16.96■□□□□ 0.31
TROAP-207ENST00000548311 IFNLR1Q8IU57 520 aaPredicted RBP16.96■□□□□ 0.31
TROAP-207ENST00000548311 CASP10Q92851 521 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 RPGRIP1Q96KN7 1286 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 ZBP1Q9H171 429 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 UBN1Q9NPG3 1134 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 MUTYHQ9UIF7 546 aa16.96■□□□□ 0.31
TROAP-207ENST00000548311 CLASP2O75122 1294 aaKnown RBP16.95■□□□□ 0.3
TROAP-207ENST00000548311 NPTXRO95502 500 aa16.95■□□□□ 0.3
TROAP-207ENST00000548311 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
TROAP-207ENST00000548311 LIG1P18858 919 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms