RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CPLX1O14810 134 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 MARCH6O60337 910 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 ZNF623O75123 536 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 OR1G1P47890 313 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 RAB27AP51159 221 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 CLCN4P51793 760 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 CCDC149Q6ZUS6 474 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 AGXT2Q9BYV1 514 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 SFXN1Q9H9B4 322 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 RSAD1Q9HA92 442 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 MRPL17Q9NRX2 175 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 PRG3Q9Y2Y8 225 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 CYP3A7-CYP3A51PA0A087WV96 503 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 CCDC195A0A1B0GUA6 201 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 ZBTB39O15060 712 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 NARSO43776 548 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 CFHP08603 1231 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 CYP3A7P24462 503 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 GBP2P32456 591 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 QARSP47897 775 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 NUBP1P53384 320 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 LAMTOR4Q0VGL1 99 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 TDGQ13569 410 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 OTOP3Q7RTS5 596 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 SIX5Q8N196 739 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 CPB2Q96IY4 423 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 KCNK12Q9HB15 430 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 MIOSQ9NXC5 875 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 HES2Q9Y543 173 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 TRIP11Q15643 1979 aa13.37□□□□□ -0.27
TRAFD1-205ENST00000548277 PRR23AA6NEV1 266 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 F8W810 466 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 M0R2N6 131 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 DEXIO95424 95 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 ITGA4P13612 1032 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 NPR3P17342 541 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 CLCN5P51795 746 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 CWF19L1Q69YN2 538 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 RUFY3Q7L099 469 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 MRPL10Q7Z7H8 261 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 RNF149Q8NC42 400 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 SLC7A3Q8WY07 619 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 RABGGTAQ92696 567 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 B3GALT6Q96L58 329 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 KANSL3Q9P2N6 904 aa13.36□□□□□ -0.27
TRAFD1-205ENST00000548277 CCDC194A0A1B0GVG4 234 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 PROB1E7EW31 1015 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 CCNT1O60563 726 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 LILRB3O75022 631 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 RFPL2O75678 378 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 ERLIN2O94905 339 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 URODP06132 367 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 RFX1P22670 979 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 NBL1P41271 181 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 NPY5RQ15761 445 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 ADSSL1Q8N142 457 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 FBXL16Q8N461 479 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 SMG8Q8ND04 991 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 DYDC2Q96IM9 177 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 GAD1Q99259 594 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 CA14Q9ULX7 337 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 ZFHX2Q9C0A1 2572 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 MYH15Q9Y2K3 1946 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
TRAFD1-205ENST00000548277 A0A087WWV3 80 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 INPPL1O15357 1258 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 TEX28O15482 410 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms