RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 STAMQ92783 540 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 CCDC51Q96ER9 411 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 TRAIPQ9BWF2 469 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 ZHX3Q9H4I2 956 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 LAMA3Q16787 3333 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 C9IYK1 514 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 ACKR2O00590 384 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 SLC16A4O15374 487 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 TRAK2O60296 914 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 PRKCBP05771 671 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 IDEP14735 1019 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 AFMP43652 599 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 SARSP49591 514 aaKnown RBP12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 ASIC1P78348 528 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 AMHR2Q16671 573 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 TWF2Q6IBS0 349 aaKnown RBP12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 KANK3Q6NY19 840 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 NOTUMQ6P988 496 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 KRBA2Q6ZNG9 492 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 SFR1Q86XK3 245 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 ST6GALNAC4Q9H4F1 302 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 PANK4Q9NVE7 773 aa12.53□□□□□ -0.4
CALCOCO1-208ENST00000547988 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 K7ENM7 598 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 GJB5O95377 273 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 STAG3L1P0CL83 205 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 SKIP12755 728 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 ARF4P18085 180 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 HOXA11P31270 313 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 RAB27AP51159 221 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 STRN3Q13033 797 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 UNC13DQ70J99 1090 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 HAUS6Q7Z4H7 955 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 HERC6Q8IVU3 1022 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 TIGD1Q96MW7 591 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 FIZ1Q96SL8 496 aa12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 ELAC1Q9H777 363 aaKnown RBP12.52□□□□□ -0.41
CALCOCO1-208ENST00000547988 A0A1B0GUA9 196 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 N4BP3O15049 544 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 B4GALT5O43286 388 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 GTPBP6O43824 516 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 EOMESO95936 686 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 LIG1P18858 919 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 FAM189BP81408 668 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 GTF2BQ00403 316 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 COASYQ13057 564 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 CUL4BQ13620 913 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 ALCAMQ13740 583 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 GRAMD1CQ8IYS0 662 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 CPB2Q96IY4 423 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 BLZF1Q9H2G9 400 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 MRPL44Q9H9J2 332 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 FAM105AQ9NUU6 356 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 LRFN2Q9ULH4 789 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 PCDHB7Q9Y5E2 793 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 MYO9BQ13459 2157 aa12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-208ENST00000547988 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZNF623O75123 536 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 NR1I2O75469 434 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 PPP1R37O75864 691 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 UPP2O95045 317 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 EDN1P05305 212 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 NMT1P30419 496 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 EHHADHQ08426 723 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 RAB30Q15771 203 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 HABP4Q5JVS0 413 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ATF7IP2Q5U623 682 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZPBP2Q6X784 338 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZNF720Q7Z2F6 126 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms