RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 IQSEC1Q6DN90 963 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 APBB1IPQ7Z5R6 666 aaPredicted RBP3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 GLCCI1Q86VQ1 547 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 VRK3Q8IV63 474 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 NOSTRINQ8IVI9 506 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 BCL6BQ8N143 479 aaPredicted RBP3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 SUPT20HQ8NEM7 779 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 FAM193BQ96PV7 902 aaPredicted RBP3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 MLST8Q9BVC4 326 aa3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 RBM8AQ9Y5S9 174 aaKnown RBP3.67□□□□□ -1.82
DEPDC4-204ENST00000547823 LRP6O75581 1613 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 JCADQ9P266 1359 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 SCDO00767 359 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 MAFGO15525 162 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 MTSS1O43312 755 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 NPTXRO95502 500 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ADAM8P78325 824 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 BLOC1S1P78537 153 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ROM1Q03395 351 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ARID5AQ03989 594 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 EPHA10Q5JZY3 1008 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 OLFML1Q6UWY5 402 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 RD3Q7Z3Z2 195 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 CELF2-AS1Q8N7Q2 184 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 PLA2G15Q8NCC3 412 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 OR5AN1Q8NGI8 311 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ST8SIA2Q92186 375 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 MYEOVQ96EZ4 313 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 RPL10LQ96L21 214 aaKnown RBP3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ZNF512Q96ME7 567 aaPredicted RBP3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 CDC6Q99741 560 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 SLC46A2Q9BY10 475 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 C14orf93Q9H972 538 aaKnown RBP3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ST7Q9NRC1 585 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 INSL6Q9Y581 213 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 PCDHA8Q9Y5H6 950 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 B3GALT1Q9Y5Z6 326 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 RGS12O14924 1447 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 SAMD9Q5K651 1589 aa3.66□□□□□ -1.82
DEPDC4-204ENST00000547823 ZC3H13Q5T200 1668 aaKnown RBP3.65□□□□□ -1.82
DEPDC4-204ENST00000547823 ABCC1P33527 1531 aa3.65□□□□□ -1.82
DEPDC4-204ENST00000547823 EP400Q96L91 3159 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 TRBV23-1A0A0A0MS06 115 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 GRXCR1A8MXD5 290 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 PROB1E7EW31 1015 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 DAPK3O43293 454 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 ZNF37AP17032 561 aaPredicted RBP3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 ERCC5P28715 1186 aaPredicted RBP3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 FNTBP49356 437 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 DNM2P50570 870 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 NPEPPSP55786 919 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 SPIDRQ14159 915 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 YOD1Q5VVQ6 348 aaPredicted RBP3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 ANKS3Q6ZW76 656 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 BHLHA9Q7RTU4 235 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 MB21D1Q8N884 522 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 HNRNPLLQ8WVV9 542 aaKnown RBP3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 DLG3Q92796 817 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 COQ10AQ96MF6 247 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 PDCD2LQ9BRP1 358 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 SPATA9Q9BWV2 254 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 CELF4Q9BZC1 486 aaKnown RBP3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 IGSF5Q9NSI5 407 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 KCMF1Q9P0J7 381 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 COL16A1Q07092 1604 aaPredicted RBP3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 SHPRHQ149N8 1683 aa3.65□□□□□ -1.83
DEPDC4-204ENST00000547823 SLC12A8A0AV02 714 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 C2orf78A6NCI8 922 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 NRP1O14786 923 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 KIAA0355O15063 1070 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 EFCAB14O75071 495 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 TOX4O94842 621 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 C1RP00736 705 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 SRGAP2CP0DJJ0 459 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 STAT3P40763 770 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 ELLP55199 621 aaPredicted RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 SEC23AQ15436 765 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 ZC3H12BQ5HYM0 836 aaKnown RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 ZNF362Q5T0B9 420 aaPredicted RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 NBPF6Q5VWK0 638 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 MICALCLQ6ZW33 695 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 HDGFL2Q7Z4V5 671 aaPredicted RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 BMP8AQ7Z5Y6 402 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 CLEC14AQ86T13 490 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 ELOA2Q8IYF1 753 aaPredicted RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 CMTM4Q8IZR5 234 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 CPT1CQ8TCG5 803 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 SLC9A6Q92581 669 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 NKD2Q969F2 451 aaPredicted RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 NBPF4Q96M43 638 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 WDR92Q96MX6 357 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 POLR3BQ9NW08 1133 aaPredicted RBP3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 SYNPO2Q9UMS6 1093 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 SORCS3Q9UPU3 1222 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 LRRC9Q6ZRR7 1453 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 SPATA31A6Q5VVP1 1343 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 ARHGAP5Q13017 1502 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 KDM5DQ9BY66 1539 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms