RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 DRC1Q96MC2 740 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 TYW1Q9NV66 732 aaKnown RBP20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 PRMT7Q9NVM4 692 aaPredicted RBP20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 KCND2Q9NZV8 630 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 HCSTQ9UBK5 93 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 ZDHHC9Q9Y397 364 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 COL4A4P53420 1690 aaPredicted RBP20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 MEIS3P2A8K0S8 358 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 SFI1A8K8P3 1242 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 PPP6R2O75170 966 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 BRD1O95696 1058 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 NPTX2P47972 431 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 PEX3P56589 373 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 DHX8Q14562 1220 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 MCM6Q14566 821 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 CCDC85BQ15834 202 aaPredicted RBP20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 MAPK6Q16659 721 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 ARSHQ5FYA8 562 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 LRRC55Q6ZSA7 311 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 MRPL10Q7Z7H8 261 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 PPM1EQ8WY54 764 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 CCDC51Q96ER9 411 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 PRIMPOLQ96LW4 560 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 PLVAPQ9BX97 442 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 EIF2AQ9BY44 585 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 CCDC113Q9H0I3 377 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 LMCD1Q9NZU5 365 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
PRPF40B-206ENST00000547764 NPHP3-ACAD11A0A0J9YXS1 232 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 A0A1B0GUA9 196 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 TTLL13PA6NNM8 815 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 CCDC169A6NNP5 214 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 PRKCBP05771 671 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 LIG1P18858 919 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 DDIT3P35638 169 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 TXLNAP40222 546 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 EFNA5P52803 228 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 DMP1Q13316 513 aaPredicted RBP20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 SPOUT1Q5T280 376 aaKnown RBP20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 GPBP1Q86WP2 473 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 CDR2LQ86X02 465 aaPredicted RBP20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 MICALL1Q8N3F8 863 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 SMG8Q8ND04 991 aaKnown RBP20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 PGBD4Q96DM1 585 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 C11orf84Q9BUA3 381 aaPredicted RBP20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 CWH43Q9H720 699 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 C17orf75Q9HAS0 396 aa20.67■□□□□ 0.9
PRPF40B-206ENST00000547764 ACKR2O00590 384 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 NCLP19338 710 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 DNM1Q05193 864 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 PRPF4BQ13523 1007 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 ATL3Q6DD88 541 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 AGMOQ6ZNB7 445 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 LRRC43Q8N309 656 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 LARP4BQ92615 738 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 P2RX5Q93086 422 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 USP20Q9Y2K6 914 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 IPPQ9Y573 584 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 CNTNAP2Q9UHC6 1331 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 KIAA1671Q9BY89 1806 aa20.66■□□□□ 0.9
PRPF40B-206ENST00000547764 GRM6O15303 877 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 OFD1O75665 1012 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 EDN1P05305 212 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 NAALADL2Q58DX5 795 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 RRAGBQ5VZM2 374 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 SLC27A1Q6PCB7 646 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 KLHL23Q8NBE8 558 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 CNNM3Q8NE01 707 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 NTPCRQ9BSD7 190 aaKnown RBP20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 KMT5AQ9NQR1 393 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 AAASQ9NRG9 546 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 STK17AQ9UEE5 414 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 CFAP45Q9UL16 551 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
PRPF40B-206ENST00000547764 PRUNE2Q8WUY3 3088 aa20.64■□□□□ 0.9
PRPF40B-206ENST00000547764 K7ERI5 159 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 NPTXRO95502 500 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 ITGB1P05556 798 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 ITGA4P13612 1032 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 PLS3P13797 630 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 PTPROQ16827 1216 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 TMEM132AQ24JP5 1023 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 COLGALT1Q8NBJ5 622 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 SPIRE2Q8WWL2 714 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 RSPH1Q8WYR4 309 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 MRPL38Q96DV4 380 aaKnown RBP20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 REEP2Q9BRK0 252 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 MRPL9Q9BYD2 267 aaKnown RBP20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 PANK2Q9BZ23 570 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 TRIM6Q9C030 488 aaPredicted RBP20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 RNF39Q9H2S5 420 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 PDZD7Q9H5P4 517 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 RSAD1Q9HA92 442 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 ARHGAP28Q9P2N2 729 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 ODF2LQ9ULJ1 636 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 INPP5FQ9Y2H2 1132 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 RBM19Q9Y4C8 960 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms