RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 LAG3P18627 525 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 PAN2Q504Q3 1202 aaKnown RBP25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 ATL3Q6DD88 541 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 FAM173BQ6P4H8 233 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 MAEAQ7L5Y9 396 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 ABI1Q8IZP0 508 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 CDK5RAP3Q96JB5 506 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 PCDHB12Q9Y5F1 795 aa25.73■■□□□ 1.71
CTDSP2-203ENST00000547701 ACKR2O00590 384 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 ZSCAN22P10073 491 aaPredicted RBP25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 PLCB3Q01970 1234 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 COL19A1Q14993 1142 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 MAPK6Q16659 721 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 TIGD5Q53EQ6 642 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 AGMOQ6ZNB7 445 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 SPPL3Q8TCT6 385 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 RUSC1Q9BVN2 902 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 TMEM134Q9H6X4 195 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 LZTS1Q9Y250 596 aa25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 RBM19Q9Y4C8 960 aaKnown RBP25.72■■□□□ 1.71
CTDSP2-203ENST00000547701 PPP6R2O75170 966 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 OFD1O75665 1012 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 ITGB1P05556 798 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 PLA2G4BP0C869 781 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 CAMK1Q14012 370 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 KLHL23Q8NBE8 558 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 LINC00301Q8NCQ3 95 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 SMG8Q8ND04 991 aaKnown RBP25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 SLC17A8Q8NDX2 589 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 SPIRE2Q8WWL2 714 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 BLOC1S4Q9NUP1 217 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 ARHGAP28Q9P2N2 729 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 KANSL3Q9P2N6 904 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 COG5Q9UP83 839 aa25.71■■□□□ 1.71
CTDSP2-203ENST00000547701 GRM6O15303 877 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 YEATS4O95619 227 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 SCP2P22307 547 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 SLC27A1Q6PCB7 646 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 GLB1LQ6UWU2 654 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 COLGALT1Q8NBJ5 622 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 ATXN2LQ8WWM7 1075 aaKnown RBP25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 ZNF396Q96N95 335 aaPredicted RBP25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 ODF2LQ9ULJ1 636 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 PLXNA4Q9HCM2 1894 aa25.7■■□□□ 1.7
CTDSP2-203ENST00000547701 HIP1RO75146 1068 aa25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 PPM1AP35813 382 aa25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 NPTX2P47972 431 aa25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 KRI1Q8N9T8 703 aaKnown RBP25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 DEPTORQ8TB45 409 aa25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 HELQQ8TDG4 1101 aa25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 IPPQ9Y573 584 aa25.69■■□□□ 1.7
CTDSP2-203ENST00000547701 NCK2O43639 380 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 F13A1P00488 732 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 MARCKSP29966 332 aaPredicted RBP25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 DDIT3P35638 169 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 DMP1Q13316 513 aaPredicted RBP25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 ARSHQ5FYA8 562 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 NOMO2Q5JPE7 1267 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 PDE12Q6L8Q7 609 aaKnown RBP25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 KCNT2Q6UVM3 1135 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 LRRC15Q8TF66 581 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 RAD54LQ92698 747 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 NSUN3Q9H649 340 aaKnown RBP25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 RSAD1Q9HA92 442 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 STK17AQ9UEE5 414 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 GIT1Q9Y2X7 761 aa25.68■■□□□ 1.7
CTDSP2-203ENST00000547701 NCOR1O75376 2440 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 MEIS3P2A8K0S8 358 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 N4BP3O15049 544 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 B4GALT5O43286 388 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 ZNF131P52739 623 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 CCDC85BQ15834 202 aaPredicted RBP25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 HACE1Q8IYU2 909 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 RNF169Q8NCN4 708 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 CPB2Q96IY4 423 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 EPSTI1Q96J88 318 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 ZNF558Q96NG5 402 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 EIF2AQ9BY44 585 aaKnown RBP25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 TBC1D13Q9NVG8 400 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 THEGQ9P2T0 379 aa25.67■■□□□ 1.7
CTDSP2-203ENST00000547701 FGF18O76093 207 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 PRKCBP05771 671 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 PLS3P13797 630 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 PLCG1P19174 1290 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 PEX3P56589 373 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 PRPF4BQ13523 1007 aaKnown RBP25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 KARSQ15046 597 aaKnown RBP25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 LPPQ93052 612 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 CCDC39Q9UFE4 941 aa25.66■■□□□ 1.7
CTDSP2-203ENST00000547701 XIRP2A4UGR9 3374 aa25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 K7ERI5 159 aa25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 ITGA4P13612 1032 aa25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 ZRSR1Q15695 479 aaKnown RBP25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 USP49Q70CQ1 688 aa25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 SLC39A11Q8N1S5 342 aa25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 LARP4BQ92615 738 aaKnown RBP25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 SYMPKQ92797 1274 aaKnown RBP25.65■■□□□ 1.7
CTDSP2-203ENST00000547701 PDZD7Q9H5P4 517 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms