RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 ODF2LQ9ULJ1 636 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 COL6A3P12111 3177 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 MEIS3P2A8K0S8 358 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 INO80B-WBP1J3KQ70 363 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 ACKR2O00590 384 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 ABLIM1O14639 778 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 B4GALT5O43286 388 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 OFD1O75665 1012 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 ERLIN2O94905 339 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 EFNA5P52803 228 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 CAMK1Q14012 370 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 GIT2Q14161 759 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 COL19A1Q14993 1142 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 TWF2Q6IBS0 349 aaKnown RBP12.08□□□□□ -0.48
GCN1-202ENST00000547263 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
GCN1-202ENST00000547263 EIF2AQ9BY44 585 aaKnown RBP12.08□□□□□ -0.48
GCN1-202ENST00000547263 LMAN2LQ9H0V9 348 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 CERS4Q9HA82 394 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 PTPRHQ9HD43 1115 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
GCN1-202ENST00000547263 LRFN2Q9ULH4 789 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
GCN1-202ENST00000547263 PCDHB2Q9Y5E7 798 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
GCN1-202ENST00000547263 TDRD15B5MCY1 1934 aaKnown RBP12.07□□□□□ -0.48
GCN1-202ENST00000547263 CUTAO60888 179 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 PLS3P13797 630 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 PROZP22891 400 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 NCKAP1LP55160 1127 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 CEBPZQ03701 1054 aaKnown RBP12.07□□□□□ -0.48
GCN1-202ENST00000547263 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
GCN1-202ENST00000547263 STK38Q15208 465 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 MAPK6Q16659 721 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 SPECC1Q5M775 1068 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 SHC4Q6S5L8 630 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 LRRC43Q8N309 656 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 TMEM161BQ8NDZ6 487 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 GSTCDQ8NEC7 633 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 MAFAQ8NHW3 353 aaPredicted RBP12.07□□□□□ -0.48
GCN1-202ENST00000547263 DEPTORQ8TB45 409 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 KCNG4Q8TDN1 519 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 PGBD4Q96DM1 585 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 MRPL38Q96DV4 380 aaKnown RBP12.07□□□□□ -0.48
GCN1-202ENST00000547263 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 IFT74Q96LB3 600 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 PLIN2Q99541 437 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 REEP2Q9BRK0 252 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 TYW1Q9NV66 732 aaKnown RBP12.07□□□□□ -0.48
GCN1-202ENST00000547263 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 KCNG1Q9UIX4 513 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 PLAGL2Q9UPG8 496 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 IPPQ9Y573 584 aa12.07□□□□□ -0.48
GCN1-202ENST00000547263 FAM237AA0A1B0GTK4 181 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 TBKBP1A7MCY6 615 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 N4BP3O15049 544 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 PRKCBP05771 671 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 SCP2P22307 547 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 PEX3P56589 373 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 UBE3AQ05086 875 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
GCN1-202ENST00000547263 GPM6BQ13491 265 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 BECN1Q14457 450 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 MCM6Q14566 821 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
GCN1-202ENST00000547263 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 SLC27A1Q6PCB7 646 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 COLGALT1Q8NBJ5 622 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 SPPL3Q8TCT6 385 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 DNAJC19Q96DA6 116 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 CPB2Q96IY4 423 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 C11orf84Q9BUA3 381 aaPredicted RBP12.06□□□□□ -0.48
GCN1-202ENST00000547263 KIFC3Q9BVG8 833 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 MRPL9Q9BYD2 267 aaKnown RBP12.06□□□□□ -0.48
GCN1-202ENST00000547263 ST6GALNAC4Q9H4F1 302 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 CCDC39Q9UFE4 941 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 CFAP45Q9UL16 551 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 LZTS1Q9Y250 596 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 TNFSF13BQ9Y275 285 aa12.06□□□□□ -0.48
GCN1-202ENST00000547263 PDCD11Q14690 1871 aaKnown RBP12.06□□□□□ -0.48
GCN1-202ENST00000547263 CARNS1A5YM72 827 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 GRM6O15303 877 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 B4GALT3O60512 393 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 PPP1R37O75864 691 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 EFEMP2O95967 443 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 PIGRP01833 764 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms