RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PPM1AP35813 382 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 RAB27AP51159 221 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 BCAR1P56945 870 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 ZP2Q05996 745 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 MBTD1Q05BQ5 628 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 SMAD4Q13485 552 aaKnown RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 SMAD2Q15796 467 aaKnown RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 AMHR2Q16671 573 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 FAM184AQ8NB25 1140 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 BCL7CQ8WUZ0 217 aaPredicted RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 RSPH1Q8WYR4 309 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 PPP2R3CQ969Q6 453 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 TCF25Q9BQ70 676 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 NFKBIZQ9BYH8 718 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 TBC1D13Q9NVG8 400 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 SPG21Q9NZD8 308 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 DBR1Q9UK59 544 aaKnown RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 MTCL1Q9Y4B5 1905 aaKnown RBP11.47□□□□□ -0.57
BEST3-208ENST00000547208 HIDE1A8MVS5 230 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 PI4K2BG5E9Z4 385 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 GPR37L1O60883 481 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 EYA4O95677 639 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 RPA1P27694 616 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 NDUFV1P49821 464 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 COASYQ13057 564 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 PCBP1Q15365 356 aaKnown RBP eCLIP11.46□□□□□ -0.57
BEST3-208ENST00000547208 ECM1Q16610 540 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 NOMO2Q5JPE7 1267 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 PLPP4Q5VZY2 271 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 GLB1LQ6UWU2 654 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 GJD3Q8N144 294 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 SMRP1Q8NCR6 262 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 SMG8Q8ND04 991 aaKnown RBP11.46□□□□□ -0.57
BEST3-208ENST00000547208 MICAL1Q8TDZ2 1067 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 TMX3Q96JJ7 454 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 TBC1D32Q96NH3 1257 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 POLR3FQ9H1D9 316 aaPredicted RBP11.46□□□□□ -0.57
BEST3-208ENST00000547208 NRDE2Q9H7Z3 1164 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 TLE6Q9H808 572 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 GPRC5CQ9NQ84 441 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 PRKAG3Q9UGI9 489 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 CD207Q9UJ71 328 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 BARX2Q9UMQ3 279 aaPredicted RBP11.46□□□□□ -0.57
BEST3-208ENST00000547208 PCDHB6Q9Y5E3 794 aa11.46□□□□□ -0.57
BEST3-208ENST00000547208 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.58
BEST3-208ENST00000547208 TRIOO75962 3097 aa11.46□□□□□ -0.58
BEST3-208ENST00000547208 ZNF318Q5VUA4 2279 aa11.46□□□□□ -0.58
BEST3-208ENST00000547208 NT5C1B-RDH14C9J2C7 533 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 INPPL1O15357 1258 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 ST18O60284 1047 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 ZC3H11AO75152 810 aaKnown RBP eCLIP11.45□□□□□ -0.58
BEST3-208ENST00000547208 DDHD2O94830 711 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 GALTP07902 379 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 NCLP19338 710 aaKnown RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 AXLP30530 894 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 TFDP1Q14186 410 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 IL17AQ16552 155 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 TMEM184AQ6ZMB5 413 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 ZNF280BQ86YH2 543 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 ADHFE1Q8IWW8 467 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 CPB2Q96IY4 423 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 CDCA3Q99618 268 aaPredicted RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 VN1R3Q9BXE9 311 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 EIF2AQ9BY44 585 aaKnown RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 NGRNQ9NPE2 291 aaKnown RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 ENTPD7Q9NQZ7 604 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 PUF60Q9UHX1 559 aaKnown RBP11.45□□□□□ -0.58
BEST3-208ENST00000547208 FAM50BQ9Y247 325 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 INPP5FQ9Y2H2 1132 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 HCN4Q9Y3Q4 1203 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
BEST3-208ENST00000547208 CNTNAP2Q9UHC6 1331 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 C2orf71A6NGG8 1288 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 INO80B-WBP1J3KQ70 363 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 HAX1O00165 279 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 B4GALT5O43286 388 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 ERLIN2O94905 339 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 MUTP22033 750 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 SLC11A1P49279 550 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 ALDH7A1P49419 539 aaKnown RBP11.44□□□□□ -0.58
BEST3-208ENST00000547208 NUBP1P53384 320 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 KRT17Q04695 432 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 PTGDRQ13258 359 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 CDCA2Q69YH5 1023 aaPredicted RBP11.44□□□□□ -0.58
BEST3-208ENST00000547208 NOTUMQ6P988 496 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 MAEAQ7L5Y9 396 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 MRPL43Q8N983 215 aaKnown RBP11.44□□□□□ -0.58
BEST3-208ENST00000547208 IGSF22Q8N9C0 903 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms