RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 TCP1P17987 556 aaKnown RBP13.78□□□□□ -0.2
SCAF11-209ENST00000547018 LMNB1P20700 586 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 DRP2Q13474 957 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 CATSPERGQ6ZRH7 1159 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 RPUSD2Q8IZ73 545 aaKnown RBP13.78□□□□□ -0.2
SCAF11-209ENST00000547018 COPS5Q92905 334 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 TBX20Q9UMR3 447 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 ADSSP30520 456 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 TERF2Q15554 542 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 STXBP2Q15833 593 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 SLC47A2Q86VL8 602 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 SLC35G2Q8TBE7 412 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 SEMA4DQ92854 862 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
SCAF11-209ENST00000547018 DPH5Q9H2P9 285 aa13.78□□□□□ -0.2
SCAF11-209ENST00000547018 HEXIM1O94992 359 aaKnown RBP13.77□□□□□ -0.2
SCAF11-209ENST00000547018 FTLP02792 175 aaPredicted RBP13.77□□□□□ -0.2
SCAF11-209ENST00000547018 PSAPP07602 524 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 ITGA4P13612 1032 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 MARSP56192 900 aaKnown RBP13.77□□□□□ -0.2
SCAF11-209ENST00000547018 GPS2Q13227 327 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 ZBTB41Q5SVQ8 909 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 DAB2IPQ5VWQ8 1189 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 KCTD16Q68DU8 428 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 FNBP1Q96RU3 617 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 L1RE1Q9UN81 338 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 CD2APQ9Y5K6 639 aa13.77□□□□□ -0.2
SCAF11-209ENST00000547018 NOP56O00567 594 aaKnown RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 PLA2G6O60733 806 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 CYP2C8P10632 490 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 FERP16591 822 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 JAK3P52333 1124 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 DPH6Q7L8W6 267 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 TMEM130Q8N3G9 435 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 IQCDQ96DY2 449 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 TMEM206Q9H813 350 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 BUB1BO60566 1050 aaPredicted RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 GGPS1O95749 300 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 GLI1P08151 1106 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 ZNF131P52739 623 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 MAP3K10Q02779 954 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 INTS8Q75QN2 995 aaKnown RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 SMAP1Q8IYB5 467 aaPredicted RBP13.77□□□□□ -0.21
SCAF11-209ENST00000547018 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
SCAF11-209ENST00000547018 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 TMEM161BQ8NDZ6 487 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
SCAF11-209ENST00000547018 EDEM3Q9BZQ6 932 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 ZNF302Q9NR11 478 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 BCRP11274 1271 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 KCNA2P16389 499 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 TUBB2AQ13885 445 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 GOLGA6L1Q8N7Z2 621 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 TUBB2BQ9BVA1 445 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 STK33Q9BYT3 514 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 PRDM4Q9UKN5 801 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 RPTORQ8N122 1335 aa13.76□□□□□ -0.21
SCAF11-209ENST00000547018 K7ERI5 159 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 KRIT1O00522 736 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 FBXO16Q8IX29 292 aaPredicted RBP13.75□□□□□ -0.21
SCAF11-209ENST00000547018 MSANTD4Q8NCY6 345 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 VPS33BQ9H267 617 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 AMACRQ9UHK6 382 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 SNCAIPQ9Y6H5 919 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 DOCK5Q9H7D0 1870 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 EIF3JO75822 258 aaKnown RBP13.75□□□□□ -0.21
SCAF11-209ENST00000547018 MMEP08473 750 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 STRN3Q13033 797 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 Q3C1V9 767 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 GPC2Q8N158 579 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 TXLNBQ8N3L3 684 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 SLC7A3Q8WY07 619 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 AFG3L2Q9Y4W6 797 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 FGGP02679 453 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 CD58P19256 250 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 SFNP31947 248 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 GGCXP38435 758 aa13.75□□□□□ -0.21
SCAF11-209ENST00000547018 EMC2Q15006 297 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms