RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PLAAQ9Y263 795 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 STXBP5LQ9Y2K9 1186 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 NFS1Q9Y697 457 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 NAV1Q8NEY1 1877 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 DDX60LQ5H9U9 1706 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 A0A087X0T9 212 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 A0A1B0GUA9 196 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CFAP73A6NFT4 308 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 KRIT1O00522 736 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 PODXLO00592 558 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 KCNK3O14649 394 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 PMM2O15305 246 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 BUB1O43683 1085 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 SLC37A4O43826 429 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 KIF1CO43896 1103 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 KRT18P05783 430 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 FAM228BP0C875 321 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 NR2F2P24468 414 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CIITAP33076 1130 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 GMPRP36959 345 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 HSD17B3P37058 310 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 MATR3P43243 847 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 LIG3P49916 1009 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 MMP14P50281 582 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 MNAT1P51948 309 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 SLC12A3P55017 1021 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 JAM2P57087 298 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 RHBDL3P58872 404 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 PTENP60484 403 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 SNRPFP62306 86 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 SLC7A5Q01650 507 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 ALCAMQ13740 583 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 HLTFQ14527 1009 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 ITIH4Q14624 930 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 EPHA7Q15375 998 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 GKAP1Q5VSY0 366 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 POTEAQ6S8J7 498 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CEP128Q6ZU80 1094 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CACNA2D3Q8IZS8 1091 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 GBP7Q8N8V2 638 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 LINC00116Q8NCU8 138 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CCHCR1Q8TD31 782 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 SCFD1Q8WVM8 642 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 HAS1Q92839 578 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 IRF7Q92985 503 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 MKL1Q969V6 931 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CYFIP2Q96F07 1278 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 HES6Q96HZ4 224 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 RNPC3Q96LT9 517 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CITED4Q96RK1 184 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 STK33Q9BYT3 514 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 ROPN1BQ9BZX4 212 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 NSRP1Q9H0G5 558 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 TAOK3Q9H2K8 898 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 PSTPIP2Q9H939 334 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 JMJD4Q9H9V9 463 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 ROPN1Q9HAT0 212 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CD209Q9NNX6 404 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 NLRC4Q9NPP4 1024 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 ADAMTS1Q9UHI8 967 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 GGA1Q9UJY5 639 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 TFR2Q9UP52 801 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 RTCBQ9Y3I0 505 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 NOC2LQ9Y3T9 749 aaKnown RBP7.01□□□□□ -1.29
SNHG1-225ENST00000545920 CAPN7Q9Y6W3 813 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 ATAD5Q96QE3 1844 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 NRAPQ86VF7 1730 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
SNHG1-225ENST00000545920 MAPK13O15264 365 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ASAP2O43150 1006 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 NCK2O43639 380 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CEP104O60308 925 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 LILRA1O75019 489 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 RASSF9O75901 435 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 DNAJC8O75937 253 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 TDP2O95551 362 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 EYA4O95677 639 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 FTCDO95954 541 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 RECKO95980 971 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 AGTP01019 485 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 GNRH1P01148 92 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 KRT14P02533 472 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 HLA-DOAP06340 250 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CYP3A4P08684 503 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ZBTB48P10074 688 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 KLRK1P26718 216 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 PON1P27169 355 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ATP5DP30049 168 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ECHS1P30084 290 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CHRNA3P32297 505 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CXCR5P32302 372 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 MAN1A1P33908 653 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 PSMC2P35998 433 aaKnown RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 TNNI2P48788 182 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ENPEPQ07075 957 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ADCY2Q08462 1091 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ZNF844Q08AG5 666 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 XRCC4Q13426 336 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 RIPK1Q13546 671 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms