RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PRDM12Q9H4Q4 367 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 IGSF9BQ9UPX0 1349 aa8.68□□□□□ -1.02
SNHG1-223ENST00000545440 TCF20Q9UGU0 1960 aaKnown RBP8.68□□□□□ -1.02
SNHG1-223ENST00000545440 WDR64B1ANS9 1081 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 HBP1O60381 514 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 NCOR1O75376 2440 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 MICAL2O94851 1124 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 CHRNA1P02708 482 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 AMHP03971 560 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 XBP1P17861 261 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 MZF1P28698 734 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-223ENST00000545440 MRPS6P82932 125 aaKnown RBP8.67□□□□□ -1.02
SNHG1-223ENST00000545440 TAP1Q03518 808 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 DNM1Q05193 864 aaKnown RBP8.67□□□□□ -1.02
SNHG1-223ENST00000545440 MGAT3Q09327 533 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 FOXR1Q6PIV2 292 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 NLRP8Q86W28 1048 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNHG1-223ENST00000545440 CUL9Q8IWT3 2517 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 DBF4BQ8NFT6 615 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 TBCKQ8TEA7 893 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 WASF1Q92558 559 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 GTF3C6Q969F1 213 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 DMRTB1Q96MA1 342 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 AIFM3Q96NN9 605 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 RIT2Q99578 217 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 PHF20Q9BVI0 1012 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 IFIH1Q9BYX4 1025 aaKnown RBP8.67□□□□□ -1.02
SNHG1-223ENST00000545440 ZNF302Q9NR11 478 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 PCDHA2Q9Y5H9 948 aa8.67□□□□□ -1.02
SNHG1-223ENST00000545440 KDM3AQ9Y4C1 1321 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CYP3A7-CYP3A51PA0A087WV96 503 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 SMIM35A0A1B0GVV1 85 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 M0QZ92 97 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 TNFRSF10BO14763 440 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 MSH4O15457 936 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 EDIL3O43854 480 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 GAS7O60861 476 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CTDNEP1O95476 244 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 PSAPP07602 524 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CYP3A7P24462 503 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 SFNP31947 248 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 ARSDP51689 593 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 IGBP1P78318 339 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 NONOQ15233 471 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNHG1-223ENST00000545440 ME3Q16798 604 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 Q4G0T1 1027 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 LRCH2Q5VUJ6 765 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 TSHZ1Q6ZSZ6 1077 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 USP38Q8NB14 1042 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 RDM1Q8NG50 284 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 DNAJB3Q8WWF6 145 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 FAM167AQ96KS9 214 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CEP63Q96MT8 703 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 MBOAT7Q96N66 472 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CRISPLD1Q9H336 500 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 PCDHA10Q9Y5I2 948 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 CDY2AQ9Y6F7 541 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 SQORQ9Y6N5 450 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 MYH11P35749 1972 aa8.66□□□□□ -1.02
SNHG1-223ENST00000545440 REV3LO60673 3130 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 TDRD15B5MCY1 1934 aaKnown RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 CCDC194A0A1B0GVG4 234 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 LCHNA4D1U4 455 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 ZBTB42B2RXF5 422 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 ARHGEF15O94989 841 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 LARGE1O95461 756 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 TDP2O95551 362 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 GHRP10912 638 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 GCFC2P16383 781 aaKnown RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 POU3F3P20264 500 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 NEK4P51957 841 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 JAK3P52333 1124 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 HTRA4P83105 476 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 LPIN1Q14693 890 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 ZNF484Q5JVG2 852 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 FBXO47Q5MNV8 452 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 SWSAP1Q6NVH7 229 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 MTHFD1LQ6UB35 978 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 FAM43BQ6ZT52 329 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 TMCO2Q7Z6W1 182 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 MYOCDQ8IZQ8 938 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 NME8Q8N427 588 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 ETNPPLQ8TBG4 499 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 TRAPPC12Q8WVT3 735 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 RAD9AQ99638 391 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 TEKT3Q9BXF9 490 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 FAM49AQ9H0Q0 323 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 RUBCNLQ9H714 662 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 ORC3Q9UBD5 711 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-223ENST00000545440 KCNJ14Q9UNX9 436 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms