RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 SIT1Q9Y3P8 196 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 WDR81Q562E7 1941 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 CNTNAP2Q9UHC6 1331 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 TEX28O15482 410 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 MAFO75444 373 aaPredicted RBP16.57■□□□□ 0.24
RTN3-214ENST00000545432 PSMD10O75832 226 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 LAMP2P13473 410 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 HOXA11P31270 313 aaPredicted RBP16.57■□□□□ 0.24
RTN3-214ENST00000545432 USP11P51784 963 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 UBXN11Q5T124 520 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 LILRA6Q6PI73 481 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
RTN3-214ENST00000545432 GPR152Q8TDT2 470 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 RIN2Q8WYP3 895 aaPredicted RBP16.57■□□□□ 0.24
RTN3-214ENST00000545432 SCLT1Q96NL6 688 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 C6orf50Q9HD87 102 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 MARCH5Q9NX47 278 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 PIN4Q9Y237 131 aaKnown RBP16.57■□□□□ 0.24
RTN3-214ENST00000545432 INPP5FQ9Y2H2 1132 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
RTN3-214ENST00000545432 ADH1AP07327 375 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 DCNP07585 359 aaKnown RBP16.56■□□□□ 0.24
RTN3-214ENST00000545432 GNA11P29992 359 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 GBP2P32456 591 aaPredicted RBP16.56■□□□□ 0.24
RTN3-214ENST00000545432 DNM2P50570 870 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 HTR4Q13639 388 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 DHX32Q7L7V1 743 aaKnown RBP16.56■□□□□ 0.24
RTN3-214ENST00000545432 TAS1R1Q7RTX1 841 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 COLGALT2Q8IYK4 626 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 DCLK2Q8N568 766 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 ESYT1Q9BSJ8 1104 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
RTN3-214ENST00000545432 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 UNC45AQ9H3U1 944 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 ARHGEF3Q9NR81 526 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 AGPAT5Q9NUQ2 364 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 SUCLA2Q9P2R7 463 aaPredicted RBP16.56■□□□□ 0.24
RTN3-214ENST00000545432 CA14Q9ULX7 337 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 KMT2BQ9UMN6 2715 aaPredicted RBP16.56■□□□□ 0.24
RTN3-214ENST00000545432 SPTBN2O15020 2390 aa16.56■□□□□ 0.24
RTN3-214ENST00000545432 STK25O00506 426 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
RTN3-214ENST00000545432 RFPL2O75678 378 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
RTN3-214ENST00000545432 DSG1Q02413 1049 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 DSC1Q08554 894 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 PJA1Q8NG27 643 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 URGCPQ8TCY9 931 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 CCDC12Q8WUD4 166 aaPredicted RBP16.55■□□□□ 0.24
RTN3-214ENST00000545432 NELL1Q92832 810 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 RSAD1Q9HA92 442 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 ZDHHC7Q9NXF8 308 aa16.55■□□□□ 0.24
RTN3-214ENST00000545432 POTEMA6NI47 508 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 GLUD1P00367 558 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
RTN3-214ENST00000545432 URODP06132 367 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
RTN3-214ENST00000545432 Q4G0T1 1027 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 ELMSAN1Q6PJG2 1045 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 DCLRE1AQ6PJP8 1040 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 CATSPER4Q7RTX7 472 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 GPR161Q8N6U8 529 aaKnown RBP16.54■□□□□ 0.24
RTN3-214ENST00000545432 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
RTN3-214ENST00000545432 MBOAT7Q96N66 472 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 CNTNAP3BQ96NU0 1288 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 TEKT3Q9BXF9 490 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 CNTNAP3Q9BZ76 1288 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 OSBPL6Q9BZF3 934 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 UBN1Q9NPG3 1134 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 FBXO4Q9UKT5 387 aa16.54■□□□□ 0.24
RTN3-214ENST00000545432 ZFP37Q9Y6Q3 630 aaPredicted RBP16.54■□□□□ 0.24
RTN3-214ENST00000545432 CYP3A7-CYP3A51PA0A087WV96 503 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 CCDC196A0A1B0GTZ2 297 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 GAS7O60861 476 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 SDHBP21912 280 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 CYP3A7P24462 503 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 AK2P54819 239 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 MTERF2Q49AM1 385 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 ANO5Q75V66 913 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 SRGAP1Q7Z6B7 1085 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 RHPN2Q8IUC4 686 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 KSR1Q8IVT5 923 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 CNNM3Q8NE01 707 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 CCDC136Q96JN2 1154 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 JPH2Q9BR39 696 aaPredicted RBP16.53■□□□□ 0.24
RTN3-214ENST00000545432 FNIP2Q9P278 1114 aa16.53■□□□□ 0.24
RTN3-214ENST00000545432 NID2Q14112 1375 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 KLF18A0A0U1RQI7 1052 aa16.52■□□□□ 0.24
RTN3-214ENST00000545432 TMEM150BA6NC51 233 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms