RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 SNX33Q8WV41 574 aa7.43□□□□□ -1.22
COPA-206ENST00000545266 JDP2Q8WYK2 163 aa7.43□□□□□ -1.22
COPA-206ENST00000545266 RABGGTAQ92696 567 aa7.43□□□□□ -1.22
COPA-206ENST00000545266 HOXB13Q92826 284 aaPredicted RBP7.43□□□□□ -1.22
COPA-206ENST00000545266 AASDHPPTQ9NRN7 309 aa7.43□□□□□ -1.22
COPA-206ENST00000545266 LUC7L2Q9Y383 392 aaKnown RBP7.43□□□□□ -1.22
COPA-206ENST00000545266 RPTORQ8N122 1335 aa7.43□□□□□ -1.22
COPA-206ENST00000545266 XPOTO43592 962 aaKnown RBP7.42□□□□□ -1.22
COPA-206ENST00000545266 VSIG10L2P0DP72 767 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 MGAT2Q10469 447 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 SPOCD1Q6ZMY3 1216 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 GPR156Q8NFN8 814 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 GCDHQ92947 438 aaPredicted RBP7.42□□□□□ -1.22
COPA-206ENST00000545266 SLC2A13Q96QE2 648 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 UIMC1Q96RL1 719 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
COPA-206ENST00000545266 USP40Q9NVE5 1235 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 NR2E1Q9Y466 385 aa7.42□□□□□ -1.22
COPA-206ENST00000545266 OTOL1A6NHN0 477 aaPredicted RBP7.41□□□□□ -1.22
COPA-206ENST00000545266 ALDH1A2O94788 518 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 JUNP05412 331 aaKnown RBP7.41□□□□□ -1.22
COPA-206ENST00000545266 ATP2C1P98194 919 aaPredicted RBP7.41□□□□□ -1.22
COPA-206ENST00000545266 DUSP8Q13202 625 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 ACAP2Q15057 778 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 ABHD15Q6UXT9 468 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
COPA-206ENST00000545266 NEIL1Q96FI4 390 aaPredicted RBP7.41□□□□□ -1.22
COPA-206ENST00000545266 ENKD1Q9H0I2 346 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 MEGF9Q9H1U4 602 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 FAM184BQ9ULE4 1060 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 ANKRD6Q9Y2G4 727 aa7.41□□□□□ -1.22
COPA-206ENST00000545266 RBM8AQ9Y5S9 174 aaKnown RBP7.41□□□□□ -1.22
COPA-206ENST00000545266 SLC26A4O43511 780 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 TOX4O94842 621 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 RAC3P60763 192 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 MST1LQ2TV78 715 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 ZNF568Q3ZCX4 644 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 SLFN13Q68D06 897 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 ARHGEF18Q6ZSZ5 1173 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 ADGRE4PQ86SQ3 457 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 THEMISQ8N1K5 641 aaPredicted RBP7.4□□□□□ -1.22
COPA-206ENST00000545266 LILRA3Q8N6C8 439 aaPredicted RBP7.4□□□□□ -1.22
COPA-206ENST00000545266 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.4□□□□□ -1.22
COPA-206ENST00000545266 OR14K1Q8NGZ2 314 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 RIN2Q8WYP3 895 aaPredicted RBP7.4□□□□□ -1.22
COPA-206ENST00000545266 COA7Q96BR5 231 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 TEPSINQ96N21 525 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 GPHA2Q96T91 129 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 ZIM2Q9NZV7 527 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 PNMA8BQ9ULN7 279 aaPredicted RBP7.4□□□□□ -1.22
COPA-206ENST00000545266 IPPQ9Y573 584 aa7.4□□□□□ -1.22
COPA-206ENST00000545266 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
COPA-206ENST00000545266 LAMTOR5O43504 91 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 PHF2O75151 1096 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 GASTP01350 101 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 ZSCAN20P17040 1043 aaPredicted RBP7.39□□□□□ -1.23
COPA-206ENST00000545266 VCAM1P19320 739 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 BPIFB4P59827 614 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 SSBP3Q9BWW4 388 aaPredicted RBP7.39□□□□□ -1.23
COPA-206ENST00000545266 RAPGEFL1Q9UHV5 662 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 PUF60Q9UHX1 559 aaKnown RBP7.39□□□□□ -1.23
COPA-206ENST00000545266 OAZ3Q9UMX2 235 aa7.39□□□□□ -1.23
COPA-206ENST00000545266 G3BP2Q9UN86 482 aaKnown RBP7.39□□□□□ -1.23
COPA-206ENST00000545266 PLATP00750 562 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 EDNRBP24530 442 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 AKAP5P24588 427 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 CNR2P34972 360 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 CCT2P78371 535 aaKnown RBP7.38□□□□□ -1.23
COPA-206ENST00000545266 SAFB2Q14151 953 aaKnown RBP eCLIP7.38□□□□□ -1.23
COPA-206ENST00000545266 TBC1D10BQ4KMP7 808 aaPredicted RBP7.38□□□□□ -1.23
COPA-206ENST00000545266 NXNQ6DKJ4 435 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 FAM180AQ6UWF9 173 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 Q6ZVL8 140 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 ANKRD53Q8N9V6 530 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 JPH3Q8WXH2 748 aaPredicted RBP7.38□□□□□ -1.23
COPA-206ENST00000545266 HSPBAP1Q96EW2 488 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 ADI1Q9BV57 179 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 AGO3Q9H9G7 860 aaKnown RBP7.38□□□□□ -1.23
COPA-206ENST00000545266 DMRT3Q9NQL9 472 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 ING3Q9NXR8 418 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 PPP4R1LQ9P1A2 415 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 IP6K2Q9UHH9 426 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 ZNF180Q9UJW8 692 aa7.38□□□□□ -1.23
COPA-206ENST00000545266 TSPAN6O43657 245 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 PARNO95453 639 aaKnown RBP7.37□□□□□ -1.23
COPA-206ENST00000545266 GSPT1P15170 499 aaKnown RBP7.37□□□□□ -1.23
COPA-206ENST00000545266 CR2P20023 1033 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 CRHR1P34998 444 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 SEPT2Q15019 361 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 GPR135Q8IZ08 494 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 PRR18Q8N4B5 295 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.37□□□□□ -1.23
COPA-206ENST00000545266 LMF1Q96S06 567 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 NELFAQ9H3P2 528 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 BCO1Q9HAY6 547 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 RTEL1Q9NZ71 1219 aa7.37□□□□□ -1.23
COPA-206ENST00000545266 TCEAL9Q9UHQ7 104 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms