RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 GNA11P29992 359 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 USP11P51784 963 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 PHLDB3Q6NSJ2 640 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 KSR1Q8IVT5 923 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
USP28-212ENST00000544750 MYADMQ96S97 322 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 SH2D3AQ9BRG2 576 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 MRPL17Q9NRX2 175 aaKnown RBP14.42□□□□□ -0.1
USP28-212ENST00000544750 AGPAT5Q9NUQ2 364 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 MARCH5Q9NX47 278 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 GPR179Q6PRD1 2367 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 CLUHO75153 1309 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 TPRP12270 2363 aaKnown RBP14.41□□□□□ -0.1
USP28-212ENST00000544750 NOTCH4Q99466 2003 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 KMT2BQ9UMN6 2715 aaPredicted RBP14.41□□□□□ -0.1
USP28-212ENST00000544750 CCDC195A0A1B0GUA6 201 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 ALDH2P05091 517 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 SRFP11831 508 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 HOXA11P31270 313 aaPredicted RBP14.41□□□□□ -0.1
USP28-212ENST00000544750 NTRK3Q16288 839 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 UBXN11Q5T124 520 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 RNF20Q5VTR2 975 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 LRCH2Q5VUJ6 765 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 KIAA0319Q5VV43 1072 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 TAS1R1Q7RTX1 841 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 CATSPER4Q7RTX7 472 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 RHPN2Q8IUC4 686 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 KIAA2013Q8IYS2 634 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 NXPE3Q969Y0 559 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 ZNF707Q96C28 371 aaPredicted RBP14.41□□□□□ -0.1
USP28-212ENST00000544750 PGBD4Q96DM1 585 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 RPS6KC1Q96S38 1066 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 HERC2P3Q9BVR0 1158 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 TEKT3Q9BXF9 490 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 TBC1D17Q9HA65 648 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 RSAD1Q9HA92 442 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 RXFP1Q9HBX9 757 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 DLL3Q9NYJ7 618 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 SUCLA2Q9P2R7 463 aaPredicted RBP14.41□□□□□ -0.1
USP28-212ENST00000544750 SEPT9Q9UHD8 586 aaPredicted RBP14.41□□□□□ -0.1
USP28-212ENST00000544750 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 CNTNAP2Q9UHC6 1331 aa14.41□□□□□ -0.1
USP28-212ENST00000544750 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 INPPL1O15357 1258 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 TEX28O15482 410 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 RFPL2O75678 378 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 GBP2P32456 591 aaPredicted RBP14.4□□□□□ -0.1
USP28-212ENST00000544750 DNM2P50570 870 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 Q4G0T1 1027 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 ANO5Q75V66 913 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 DGLUCYQ7Z3D6 616 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 MIER3Q7Z3K6 550 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 COLGALT2Q8IYK4 626 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 URGCPQ8TCY9 931 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
USP28-212ENST00000544750 MINDY3Q9H8M7 445 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 KANSL3Q9P2N6 904 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 CA14Q9ULX7 337 aa14.4□□□□□ -0.1
USP28-212ENST00000544750 COL4A3Q01955 1670 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 EPG5Q9HCE0 2579 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 ANHXE9PGG2 379 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 C1RP00736 705 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 URODP06132 367 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 ADH1AP07327 375 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 SP9P0CG40 484 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 GLULP15104 373 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 DSC1Q08554 894 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 PUM1Q14671 1186 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP28-212ENST00000544750 NONOQ15233 471 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP28-212ENST00000544750 SUMF1Q8NBK3 374 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 BICD2Q8TD16 824 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 KCNG4Q8TDN1 519 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 GPR152Q8TDT2 470 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 HDAC7Q8WUI4 952 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 STAMQ92783 540 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 NLRP4Q96MN2 994 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 MBOAT7Q96N66 472 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 SLC2A4RGQ9NR83 387 aa14.39□□□□□ -0.11
USP28-212ENST00000544750 SPTBN2O15020 2390 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 C2CD2LO14523 706 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 GLUD1P00367 558 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 POMCP01189 267 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 DCNP07585 359 aaKnown RBP14.38□□□□□ -0.11
USP28-212ENST00000544750 LAMP2P13473 410 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
USP28-212ENST00000544750 CYP3A7P24462 503 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 AK2P54819 239 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 DSG1Q02413 1049 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 HTR4Q13639 388 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 ERICH6BQ5W0A0 696 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 C1orf210Q8IVY1 113 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
USP28-212ENST00000544750 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
USP28-212ENST00000544750 ETNPPLQ8TBG4 499 aa14.38□□□□□ -0.11
USP28-212ENST00000544750 SMG7Q92540 1137 aaKnown RBP14.38□□□□□ -0.11
USP28-212ENST00000544750 PHKBQ93100 1093 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms