RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 COLGALT1Q8NBJ5 622 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 CNNM3Q8NE01 707 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 CPB2Q96IY4 423 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 ASB2Q96Q27 587 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 RUSC1Q9BVN2 902 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
YBX3-216ENST00000544622 MRPL9Q9BYD2 267 aaKnown RBP12.64□□□□□ -0.39
YBX3-216ENST00000544622 CCSER1Q9C0I3 900 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 NSUN3Q9H649 340 aaKnown RBP12.64□□□□□ -0.39
YBX3-216ENST00000544622 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 AAASQ9NRG9 546 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 FBXO2Q9UK22 296 aaPredicted RBP12.64□□□□□ -0.39
YBX3-216ENST00000544622 COG5Q9UP83 839 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 SRPRBQ9Y5M8 271 aaKnown RBP12.64□□□□□ -0.39
YBX3-216ENST00000544622 KIAA1671Q9BY89 1806 aa12.64□□□□□ -0.39
YBX3-216ENST00000544622 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 LRRIQ4A6NIV6 560 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 ACKR2O00590 384 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 HIP1RO75146 1068 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 FGF18O76093 207 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 IRS1P35568 1242 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 TFF2Q03403 129 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
YBX3-216ENST00000544622 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 PPP2R5AQ15172 486 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 CTC1Q2NKJ3 1217 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 TIGD5Q53EQ6 642 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 ARSHQ5FYA8 562 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 SLC27A1Q6PCB7 646 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 HSCBQ8IWL3 235 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 ABI1Q8IZP0 508 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 GSTCDQ8NEC7 633 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 POF1BQ8WVV4 589 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 KCNN1Q92952 543 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 HLA-CQ95604 372 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 USP28Q96RU2 1077 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 C2orf40Q9H1Z8 148 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 UBN1Q9NPG3 1134 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 TBC1D13Q9NVG8 400 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 PRMT7Q9NVM4 692 aaPredicted RBP12.63□□□□□ -0.39
YBX3-216ENST00000544622 KCND2Q9NZV8 630 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
YBX3-216ENST00000544622 LZTS1Q9Y250 596 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 IPPQ9Y573 584 aa12.63□□□□□ -0.39
YBX3-216ENST00000544622 CNTNAP2Q9UHC6 1331 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 MYO7AQ13402 2215 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 FSCN2O14926 492 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 B4GALT3O60512 393 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 BMP1P13497 986 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 UBA7P41226 1012 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 NPTX2P47972 431 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
YBX3-216ENST00000544622 EFNA5P52803 228 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 MRPS5P82675 430 aaKnown RBP12.62□□□□□ -0.39
YBX3-216ENST00000544622 MAPK6Q16659 721 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 NOMO2Q5JPE7 1267 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 GLB1LQ6UWU2 654 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 ZBTB8OSQ8IWT0 167 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 SLC39A11Q8N1S5 342 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 PLIN2Q99541 437 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 COL25A1Q9BXS0 654 aaPredicted RBP12.62□□□□□ -0.39
YBX3-216ENST00000544622 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 ARHGAP28Q9P2N2 729 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 HES2Q9Y543 173 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 BRWD1Q9NSI6 2320 aa12.62□□□□□ -0.39
YBX3-216ENST00000544622 ATG2AQ2TAZ0 1938 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 DDHD2O94830 711 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 GALTP07902 379 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 MARCKSP29966 332 aaPredicted RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 LTBRP36941 435 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 PBX3P40426 434 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 BCAR1P56945 870 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 ERVFC1P60507 584 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 HYAL1Q12794 435 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 KARSQ15046 597 aaKnown RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 SKIV2LQ15477 1246 aaKnown RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 ZRSR1Q15695 479 aaKnown RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 SPOUT1Q5T280 376 aaKnown RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 TAS1R3Q7RTX0 852 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 CDR2LQ86X02 465 aaPredicted RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 ZNF280BQ86YH2 543 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
YBX3-216ENST00000544622 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
YBX3-216ENST00000544622 EPSTI1Q96J88 318 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms