RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
CCDC189-208ENST00000544613 POLR3FQ9H1D9 316 aaPredicted RBP13.17□□□□□ -0.3
CCDC189-208ENST00000544613 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
CCDC189-208ENST00000544613 PORCNQ9H237 461 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
CCDC189-208ENST00000544613 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 TFR2Q9UP52 801 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
CCDC189-208ENST00000544613 IQCA1LA6NCM1 817 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 PALMO75781 387 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
CCDC189-208ENST00000544613 PNMA6AP0CW24 399 aaPredicted RBP13.16□□□□□ -0.3
CCDC189-208ENST00000544613 TNFAIP3P21580 790 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 KLRC1P26715 233 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 EPHX2P34913 555 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 ARL2P36404 184 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 GPC3P51654 580 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 APBA1Q02410 837 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 HDXQ7Z353 690 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
CCDC189-208ENST00000544613 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 DHX38Q92620 1227 aaKnown RBP13.16□□□□□ -0.3
CCDC189-208ENST00000544613 TAF4BQ92750 862 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 SYT17Q9BSW7 474 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 SYT11Q9BT88 431 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 ACBD3Q9H3P7 528 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 XPNPEP1Q9NQW7 623 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
CCDC189-208ENST00000544613 SBF1O95248 1867 aa13.16□□□□□ -0.3
CCDC189-208ENST00000544613 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
CCDC189-208ENST00000544613 NCANO14594 1321 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 ZNF233A6NK53 670 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 DDX3XO00571 662 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC189-208ENST00000544613 EXTL3O43909 919 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 CNMDO75829 334 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
CCDC189-208ENST00000544613 UBA1P22314 1058 aaKnown RBP13.15□□□□□ -0.3
CCDC189-208ENST00000544613 ADSSP30520 456 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 HADHBP55084 474 aaKnown RBP13.15□□□□□ -0.3
CCDC189-208ENST00000544613 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 PPP3CAQ08209 521 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 SNAPC2Q13487 334 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 KCTD2Q14681 263 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 TARBP2Q15633 366 aaKnown RBP13.15□□□□□ -0.3
CCDC189-208ENST00000544613 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 C1orf220Q5T0J3 134 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 LDLRAD1Q5T700 205 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 PLPPR4Q7Z2D5 763 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 PARD3BQ8TEW8 1205 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 TCP11Q8WWU5 503 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 GPR88Q9GZN0 384 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 TMEM117Q9H0C3 514 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 IKZF4Q9H2S9 585 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 AZI2Q9H6S1 392 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
CCDC189-208ENST00000544613 DNAJC25-GNG10A0A024R161 153 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 ANKRD62A6NC57 917 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 ASB14A6NK59 587 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 HNRNPDLO14979 420 aaKnown RBP13.14□□□□□ -0.31
CCDC189-208ENST00000544613 LGR5O75473 907 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 CLSTN1O94985 981 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 GCLMP48507 274 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 LIG4P49917 911 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 STAT5BP51692 787 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 EFNA5P52803 228 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 AP3M2P53677 418 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 CLDN10P78369 228 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 CCNA1P78396 465 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 SP2Q02086 613 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 GABPB1Q06547 395 aaPredicted RBP13.14□□□□□ -0.31
CCDC189-208ENST00000544613 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
CCDC189-208ENST00000544613 PSMD6Q15008 389 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 BEND6Q5SZJ8 279 aaPredicted RBP13.14□□□□□ -0.31
CCDC189-208ENST00000544613 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
CCDC189-208ENST00000544613 SLFN11Q7Z7L1 901 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms