RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 CAPZA3Q96KX2 299 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 IFT74Q96LB3 600 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 MMS19Q96T76 1030 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 EDEM3Q9BZQ6 932 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 KATNBL1Q9H079 304 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 KCNG1Q9UIX4 513 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 EXOC7Q9UPT5 735 aa15.61■□□□□ 0.09
VPS33A-209ENST00000544349 ADGRA3Q8IWK6 1321 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 SLC15A5A6NIM6 579 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 TISP43B9A030 160 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 EXOC3O60645 756 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 HNRNPH3P31942 346 aaKnown RBP15.6■□□□□ 0.09
VPS33A-209ENST00000544349 RFC5P40937 340 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 VAV2P52735 878 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 CDK17Q00537 523 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 TAF1CQ15572 869 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-209ENST00000544349 TCERG1LQ5VWI1 586 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 SLC7A3Q8WY07 619 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 BBXQ8WY36 941 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-209ENST00000544349 ABCB6Q9NP58 842 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 PLAGL2Q9UPG8 496 aa15.6■□□□□ 0.09
VPS33A-209ENST00000544349 MAP2K7O14733 419 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 KRT86O43790 486 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 ARHGAP1Q07960 439 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 SMC1AQ14683 1233 aaKnown RBP15.59■□□□□ 0.09
VPS33A-209ENST00000544349 PAPD7Q5XG87 772 aaKnown RBP15.59■□□□□ 0.09
VPS33A-209ENST00000544349 TRIM50Q86XT4 487 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 TMEM143Q96AN5 459 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 PKNOX2Q96KN3 472 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 CBWD1Q9BRT8 395 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 LSM14BQ9BX40 385 aaKnown RBP15.59■□□□□ 0.09
VPS33A-209ENST00000544349 PCIF1Q9H4Z3 704 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 PPME1Q9Y570 386 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 CAPN6Q9Y6Q1 641 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 ZNF236Q9UL36 1845 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 NOL4O94818 638 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 MARK3P27448 753 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 ARL2P36404 184 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 EIF4A3P38919 411 aaKnown RBP15.59■□□□□ 0.09
VPS33A-209ENST00000544349 KIF11P52732 1056 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 INHBEP58166 350 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 APBA1Q02410 837 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 LAMC2Q13753 1193 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 IFNL1Q8IU54 200 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 NPLOC4Q8TAT6 608 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 ATP8B4Q8TF62 1192 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 ARHGAP28Q9P2N2 729 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 TLL2Q9Y6L7 1015 aa15.59■□□□□ 0.09
VPS33A-209ENST00000544349 H0YCG3 227 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 PDE2AO00408 941 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 ZNF185O15231 689 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 MAFO75444 373 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 GH1P01241 217 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 GLRA2P23416 452 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 SLC26A2P50443 739 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 PLCB4Q15147 1175 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 PPP2R5AQ15172 486 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 GJC2Q5T442 439 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 RRAGAQ7L523 313 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 ZNF784Q8NCA9 323 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 ASAP3Q8TDY4 903 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 HNRNPLLQ8WVV9 542 aaKnown RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 CCDC42Q96M95 316 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 TINF2Q9BSI4 451 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 SMARCAD1Q9H4L7 1026 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 HSPBP1Q9NZL4 362 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 CEP72Q9P209 647 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 SAR1BQ9Y6B6 198 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 FAM155AB1AL88 458 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 ANKRD63C9JTQ0 380 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 IPO7O95373 1038 aaKnown RBP15.58■□□□□ 0.08
VPS33A-209ENST00000544349 CNGA1P29973 690 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 ABCD1P33897 745 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 ADCYAP1R1P41586 468 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 NAMPTP43490 491 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 PDXDC1Q6P996 788 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 C17orf99Q6UX52 265 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 TAS1R3Q7RTX0 852 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 CACNA2D4Q7Z3S7 1137 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 XXYLT1Q8NBI6 393 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 RDH13Q8NBN7 331 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 KCNN1Q92952 543 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 SLC5A4Q9NY91 659 aa15.58■□□□□ 0.08
VPS33A-209ENST00000544349 DOCK3Q8IZD9 2030 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 MAPK13O15264 365 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 TLR2O60603 784 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 ADSSP30520 456 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 BFSP1Q12934 665 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 EXOC3L4Q17RC7 722 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 MORN1Q5T089 497 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 DPY19L2P1Q6NXN4 242 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 EHBP1Q8NDI1 1231 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 SECISBP2LQ93073 1101 aaKnown RBP15.57■□□□□ 0.08
VPS33A-209ENST00000544349 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
VPS33A-209ENST00000544349 ABHD16BQ9H3Z7 469 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 PLCB1Q9NQ66 1216 aa15.57■□□□□ 0.08
VPS33A-209ENST00000544349 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.56■□□□□ 0.08
VPS33A-209ENST00000544349 GTPBP10A4D1E9 387 aaKnown RBP15.56■□□□□ 0.08
VPS33A-209ENST00000544349 ZBTB42B2RXF5 422 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms