RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 DLGAP2Q9P1A6 1054 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 MYH13Q9UKX3 1938 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 SRRM3A6NNA2 597 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 MGRN1O60291 552 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 SNX3O60493 162 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 KRT16P08779 473 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 NKX1-1Q15270 411 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 APBB1IPQ7Z5R6 666 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 TMEM237Q96Q45 408 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 NUP85Q9BW27 656 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 CHCHD3Q9NX63 227 aaKnown RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 CTNNAL1Q9UBT7 734 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 PPP1R1BQ9UD71 204 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 USH1CQ9Y6N9 552 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 C21orf2O43822 256 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 GAS7O60861 476 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 TTLL1O95922 423 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 TMEM253P0C7T8 217 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 WLSQ5T9L3 541 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 IRF2BP2Q7Z5L9 587 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 C4orf33Q8N1A6 199 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 GRK7Q8WTQ7 553 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 TMEM165Q9HC07 324 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 SAYSD1Q9NPB0 183 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 CFAP69A5D8W1 941 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 PDXKO00764 312 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 PPIP5K2O43314 1243 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 SKIP12755 728 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 CASP5P51878 434 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 PSMC6P62333 389 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 LACTB2Q53H82 288 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 C3orf67Q6ZVT6 689 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 CYTH2Q99418 400 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 AGPAT1Q99943 283 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 STK33Q9BYT3 514 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 CDC42EP4Q9H3Q1 356 aaKnown RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 PARVGQ9HBI0 331 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 ZNF219Q9P2Y4 722 aaPredicted RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 SRP68Q9UHB9 627 aaKnown RBP9.18□□□□□ -0.94
ABCB1-210ENST00000543898 MYH6P13533 1939 aa9.18□□□□□ -0.94
ABCB1-210ENST00000543898 MED24O75448 989 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 NTSR2O95665 410 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 RCN2Q14257 317 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 SPARCL1Q14515 664 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ECM1Q16610 540 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 FBXO33Q7Z6M2 555 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 SLC30A5Q8TAD4 765 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ZNF564Q8TBZ8 553 aaPredicted RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ATG4AQ8WYN0 398 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ARHGEF26Q96DR7 871 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 PGM2Q96G03 612 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ZFATQ9P243 1243 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ZFP69BQ9UJL9 534 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ANAPC7Q9UJX3 599 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 MED1Q15648 1581 aaPredicted RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 RBAK-RBAKDNI3L0D1 243 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 FOXN3O00409 490 aaPredicted RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 OPHN1O60890 802 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 PPFIA2O75334 1257 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 CIB2O75838 187 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 AP1G2O75843 785 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 AKR1B1P15121 316 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 FMO5P49326 533 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 MTM1Q13496 603 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ARHGAP27Q6ZUM4 889 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 KRT35Q92764 455 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 POP1Q99575 1024 aaKnown RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 MXD3Q9BW11 206 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 GLT8D2Q9H1C3 349 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 GANQ9H2C0 597 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 FAM196BA6NMK8 535 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 GOLGA8SH3BPF8 625 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 GOLGA8MH3BSY2 632 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 GYG2O15488 501 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 RIPK2O43353 540 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 KLC1Q07866 573 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 KCNA1Q09470 495 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 CFAP157Q5JU67 520 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 SLFN13Q68D06 897 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 CATSPER3Q86XQ3 398 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 MYLK4Q86YV6 388 aaPredicted RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 SUPT20HQ8NEM7 779 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 DNAJC19Q96DA6 116 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 NID2Q14112 1375 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ZBTB5O15062 677 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 DCTN3O75935 186 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 GNAT1P11488 350 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 RARGP13631 454 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 PLS3P13797 630 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 COILP38432 576 aaPredicted RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 NCALDP61601 193 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ORC2Q13416 577 aaPredicted RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
ABCB1-210ENST00000543898 CNGA2Q16280 664 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms