RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 IMPACTQ9P2X3 320 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 ITSN1Q15811 1721 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 SEMA3DO95025 777 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 MYBP10242 640 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 CDH3P22223 829 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 TARSP26639 723 aaKnown RBP9.5□□□□□ -0.89
VPS13D-212ENST00000543766 RFC4P35249 363 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 STAT6P42226 847 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 PPP2R2AP63151 447 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 TUBA4AP68366 448 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 GSTM4Q03013 218 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 KRT71Q3SY84 523 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 CAVIN4Q5BKX8 364 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 NFRKBQ6P4R8 1299 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 LVRNQ6Q4G3 990 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 ZNF527Q8NB42 609 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 EXT2Q93063 718 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 NSMCE3Q96MG7 304 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 GBP5Q96PP8 586 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 PIP5K1AQ99755 562 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 SLC40A1Q9NP59 571 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 PLAAQ9Y263 795 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 TLR2O60603 784 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 ETF1P62495 437 aaKnown RBP9.5□□□□□ -0.89
VPS13D-212ENST00000543766 CDC16Q13042 620 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 METTL21CQ5VZV1 264 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 LRRC71Q8N4P6 559 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 CCNYL1Q8N7R7 359 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 AFAP1L1Q8TED9 768 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 APOL5Q9BWW9 433 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
VPS13D-212ENST00000543766 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 INIPQ9NRY2 104 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 IPPQ9Y573 584 aa9.5□□□□□ -0.89
VPS13D-212ENST00000543766 NHSL1Q5SYE7 1610 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SLC12A8A0AV02 714 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 YKT6O15498 198 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 PDE5AO76074 875 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ACAT1P24752 427 aaKnown RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 FXR1P51114 621 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 TMPRSS15P98073 1019 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 APOBRQ0VD83 1088 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 EFR3AQ14156 821 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ELMSAN1Q6PJG2 1045 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 LURAP1LQ8IV03 231 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 DQX1Q8TE96 717 aaKnown RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SGK3Q96BR1 496 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 OMA1Q96E52 524 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 MTMR8Q96EF0 704 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CEP95Q96GE4 821 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 AIFM3Q96NN9 605 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 APBA2Q99767 749 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CIB1Q99828 191 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CCDC106Q9BWC9 280 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SLITRK6Q9H5Y7 841 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 TRPC7Q9HCX4 862 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 RWDD3Q9Y3V2 267 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 GMEB1Q9Y692 573 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ARHGEF37A1IGU5 675 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 HIP1O00291 1037 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CBFA2T3O75081 653 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ARHGAP36Q6ZRI8 547 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CYP4V2Q6ZWL3 525 aaPredicted RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 LONP2Q86WA8 852 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 DHX40Q8IX18 779 aaKnown RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SCAIQ8N9R8 606 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ZNF540Q8NDQ6 660 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 RNF139Q8WU17 664 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 KIFAP3Q92845 792 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 HAUS8Q9BT25 410 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CLK4Q9HAZ1 481 aaKnown RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SMYD2Q9NRG4 433 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 DDX19AQ9NUU7 478 aaKnown RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 C15orf41Q9Y2V0 281 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 NOX1Q9Y5S8 564 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SNX8Q9Y5X2 465 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 DPPA5A6NC42 116 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 PIGNO95427 931 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CYP17A1P05093 508 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SERPINB6P35237 376 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 SERPINB8P50452 374 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 LIMK1P53667 647 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 GSDMDP57764 484 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ACY1Q03154 408 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ALG1LQ6GMV1 187 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 ERICH1Q86X53 443 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 STX12Q86Y82 276 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 PLD6Q8N2A8 252 aaKnown RBP9.49□□□□□ -0.89
VPS13D-212ENST00000543766 CPLX3Q8WVH0 158 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 EPC1Q9H2F5 836 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 WDR35Q9P2L0 1181 aa9.49□□□□□ -0.89
VPS13D-212ENST00000543766 PRRT4C9JH25 899 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 URI1O94763 535 aaPredicted RBP9.48□□□□□ -0.89
VPS13D-212ENST00000543766 CD86P42081 329 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ZNF165P49910 485 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms