RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 CYFIP2Q96F07 1278 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 NUP85Q9BW27 656 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 ESRRAP11474 423 aaPredicted RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF18P17022 549 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 MDH1P40925 334 aaKnown RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 GLE1Q53GS7 698 aaKnown RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 PPP4R1Q8TF05 950 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 CNOT10Q9H9A5 744 aaKnown RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 HEY1Q9Y5J3 304 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 DISP2A7MBM2 1401 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 GPR75-ASB3A0A0A6YYF3 556 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 RHOBTB3O94955 611 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 NDUFB10O96000 172 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 MYBP10242 640 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLC12A2P55011 1212 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 GPC5P78333 572 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLC18A3Q16572 532 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 LRRC31Q6UY01 552 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 RNF207Q6ZRF8 634 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 GIMAP8Q8ND71 665 aaPredicted RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 KLF6Q99612 283 aaPredicted RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 JMJD4Q9H9V9 463 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 GOLGB1Q14789 3259 aaKnown RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 PIK3R2O00459 728 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 TNNC2P02585 160 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 NCF2P19878 526 aaPredicted RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF543Q08ER8 600 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ACER1Q8TDN7 264 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 CHMP6Q96FZ7 201 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 SH3GLB2Q9NR46 395 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 AFG3L2Q9Y4W6 797 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 CCDC195A0A1B0GUA6 201 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 K7ERI5 159 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 STK10O94804 968 aaKnown RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 CYP2W1Q8TAV3 490 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 PIP4K2CQ8TBX8 421 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF564Q8TBZ8 553 aaPredicted RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ELMO3Q96BJ8 720 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 TMEM39BQ9GZU3 492 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ANKZF1Q9H8Y5 726 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ACTR5Q9H9F9 607 aaPredicted RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 PPARGC1AQ9UBK2 798 aaKnown RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 POLR2BP30876 1174 aaKnown RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 EIF3BP55884 814 aaKnown RBP13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 ADCY2Q08462 1091 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 KCNB1Q14721 858 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 OR6B2Q6IFH4 312 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 PDXDC2PQ6P474 469 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 SP8Q8IXZ3 490 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 KCTD6Q8NC69 237 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 CD248Q9HCU0 757 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
TUBGCP2-210ENST00000543663 PABPN1LA6NDY0 278 aaKnown RBP13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 EVI5O60447 810 aa13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 AGR3Q8TD06 166 aa13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 PDS5AQ29RF7 1337 aaKnown RBP13.83□□□□□ -0.19
TUBGCP2-210ENST00000543663 CLDN3O15551 220 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 ZC3H18Q86VM9 953 aaKnown RBP13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 SLC35G2Q8TBE7 412 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 DTX3LQ8TDB6 740 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 CFAP69A5D8W1 941 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 CLGNO14967 610 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 POLD1P28340 1107 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 EPHB1P54762 984 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 RAPH1Q70E73 1250 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 ANKMY2Q8IV38 441 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 RHOT2Q8IXI1 618 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 C4orf33Q8N1A6 199 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 PROM2Q8N271 834 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 DNAAF3Q8N9W5 541 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 CCT6BQ92526 530 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 TTC1Q99614 292 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 EIF2AK1Q9BQI3 630 aaKnown RBP13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 FZD1Q9UP38 647 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 SLC4A1P02730 911 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 RPS6KA2Q15349 733 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 NBPF9Q3BBW0 867 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 MDH1BQ5I0G3 518 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 EPM2AIP1Q7L775 607 aaPredicted RBP13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 PODNQ7Z5L7 613 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 TGS1Q96RS0 853 aaKnown RBP13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 REEP2Q9BRK0 252 aa13.83□□□□□ -0.2
TUBGCP2-210ENST00000543663 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
TUBGCP2-210ENST00000543663 CHN1P15882 459 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms