RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RNF40O75150 1001 aa15.08■□□□□ 0
MSH2-206ENST00000543555 HEXIM1O94992 359 aaKnown RBP15.08■□□□□ 0
MSH2-206ENST00000543555 TNFAIP3P21580 790 aa15.08■□□□□ 0
MSH2-206ENST00000543555 TNNC1P63316 161 aa15.08■□□□□ 0
MSH2-206ENST00000543555 APOBEC3FQ8IUX4 373 aaKnown RBP15.08■□□□□ 0
MSH2-206ENST00000543555 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
MSH2-206ENST00000543555 TMEM161BQ8NDZ6 487 aa15.08■□□□□ 0
MSH2-206ENST00000543555 ACTRT1Q8TDG2 376 aa15.08■□□□□ 0
MSH2-206ENST00000543555 RFFLQ8WZ73 363 aa15.08■□□□□ 0
MSH2-206ENST00000543555 VTI1AQ96AJ9 217 aa15.08■□□□□ 0
MSH2-206ENST00000543555 DCPSQ96C86 337 aaKnown RBP15.08■□□□□ 0
MSH2-206ENST00000543555 TBX20Q9UMR3 447 aa15.08■□□□□ 0
MSH2-206ENST00000543555 EXOC7Q9UPT5 735 aa15.08■□□□□ 0
MSH2-206ENST00000543555 PHIPQ8WWQ0 1821 aa15.07■□□□□ 0
MSH2-206ENST00000543555 CCDC169A6NNP5 214 aa15.07■□□□□ 0
MSH2-206ENST00000543555 AGPSO00116 658 aa15.07■□□□□ 0
MSH2-206ENST00000543555 KCNA2P16389 499 aa15.07■□□□□ 0
MSH2-206ENST00000543555 GGCXP38435 758 aa15.07■□□□□ 0
MSH2-206ENST00000543555 NPTX2P47972 431 aa15.07■□□□□ 0
MSH2-206ENST00000543555 SMTNP53814 917 aa15.07■□□□□ 0
MSH2-206ENST00000543555 PTPROQ16827 1216 aa15.07■□□□□ 0
MSH2-206ENST00000543555 DAAM2Q86T65 1068 aa15.07■□□□□ 0
MSH2-206ENST00000543555 NT5DC3Q86UY8 548 aa15.07■□□□□ 0
MSH2-206ENST00000543555 MAP4K3Q8IVH8 894 aa15.07■□□□□ 0
MSH2-206ENST00000543555 METTL13Q8N6R0 699 aa15.07■□□□□ 0
MSH2-206ENST00000543555 NSUN6Q8TEA1 469 aaKnown RBP15.07■□□□□ 0
MSH2-206ENST00000543555 CTNNBL1Q8WYA6 563 aaPredicted RBP15.07■□□□□ 0
MSH2-206ENST00000543555 CAVIN3Q969G5 261 aa15.07■□□□□ 0
MSH2-206ENST00000543555 HVCN1Q96D96 273 aa15.07■□□□□ 0
MSH2-206ENST00000543555 GABBR1Q9UBS5 961 aa15.07■□□□□ 0
MSH2-206ENST00000543555 RLFQ13129 1914 aa15.07■□□□□ 0
MSH2-206ENST00000543555 GOLGA6BA6NDN3 693 aa15.07■□□□□ 0
MSH2-206ENST00000543555 C19orf81C9J6K1 198 aa15.07■□□□□ 0
MSH2-206ENST00000543555 PMM2O15305 246 aa15.07■□□□□ 0
MSH2-206ENST00000543555 CEP104O60308 925 aa15.07■□□□□ 0
MSH2-206ENST00000543555 ADRB2P07550 413 aa15.07■□□□□ 0
MSH2-206ENST00000543555 MXI1P50539 228 aa15.07■□□□□ 0
MSH2-206ENST00000543555 DMP1Q13316 513 aaPredicted RBP15.07■□□□□ 0
MSH2-206ENST00000543555 TMEM132BQ14DG7 1078 aa15.07■□□□□ 0
MSH2-206ENST00000543555 OTUD6AQ7L8S5 288 aa15.07■□□□□ 0
MSH2-206ENST00000543555 SULF1Q8IWU6 871 aa15.07■□□□□ 0
MSH2-206ENST00000543555 TAF1DQ9H5J8 278 aaPredicted RBP15.07■□□□□ 0
MSH2-206ENST00000543555 OSGEPQ9NPF4 335 aa15.07■□□□□ 0
MSH2-206ENST00000543555 COL11A1P12107 1806 aaPredicted RBP15.06■□□□□ 0
MSH2-206ENST00000543555 GOLGA8IPA6NC78 632 aa15.06■□□□□ 0
MSH2-206ENST00000543555 GOLGA8JA6NMD2 632 aa15.06■□□□□ 0
MSH2-206ENST00000543555 ZNF862O60290 1169 aa15.06■□□□□ 0
MSH2-206ENST00000543555 RGS20O76081 388 aa15.06■□□□□ 0
MSH2-206ENST00000543555 ABCB4P21439 1286 aa15.06■□□□□ 0
MSH2-206ENST00000543555 ADSSP30520 456 aa15.06■□□□□ 0
MSH2-206ENST00000543555 MCCD1P59942 119 aaPredicted RBP15.06■□□□□ 0
MSH2-206ENST00000543555 SLC35G2Q8TBE7 412 aa15.06■□□□□ 0
MSH2-206ENST00000543555 SCFD2Q8WU76 684 aa15.06■□□□□ 0
MSH2-206ENST00000543555 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
MSH2-206ENST00000543555 AGPAT1Q99943 283 aa15.06■□□□□ 0
MSH2-206ENST00000543555 KIFC3Q9BVG8 833 aa15.06■□□□□ 0
MSH2-206ENST00000543555 TMEM117Q9H0C3 514 aa15.06■□□□□ 0
MSH2-206ENST00000543555 EPB41L5Q9HCM4 733 aa15.06■□□□□ 0
MSH2-206ENST00000543555 DICER1Q9UPY3 1922 aaKnown RBP15.06■□□□□ 0
MSH2-206ENST00000543555 IGSF9BQ9UPX0 1349 aa15.06■□□□□ 0
MSH2-206ENST00000543555 ZSCAN5CA6NGD5 496 aaPredicted RBP15.06■□□□□ 0
MSH2-206ENST00000543555 ANKRD63C9JTQ0 380 aa15.06■□□□□ 0
MSH2-206ENST00000543555 LMAN1P49257 510 aa15.06■□□□□ 0
MSH2-206ENST00000543555 GUCY2DQ02846 1103 aa15.06■□□□□ 0
MSH2-206ENST00000543555 PALB2Q86YC2 1186 aa15.06■□□□□ 0
MSH2-206ENST00000543555 RIN2Q8WYP3 895 aaPredicted RBP15.06■□□□□ 0
MSH2-206ENST00000543555 ATP6V0A1Q93050 837 aa15.06■□□□□ 0
MSH2-206ENST00000543555 HES6Q96HZ4 224 aa15.06■□□□□ 0
MSH2-206ENST00000543555 CEP170P1Q96L14 293 aa15.06■□□□□ 0
MSH2-206ENST00000543555 SEPT11Q9NVA2 429 aaKnown RBP15.06■□□□□ 0
MSH2-206ENST00000543555 TAS2R14Q9NYV8 317 aa15.06■□□□□ 0
MSH2-206ENST00000543555 USP20Q9Y2K6 914 aa15.06■□□□□ 0
MSH2-206ENST00000543555 DENND3A2RUS2 1198 aa15.06■□□□□ 0
MSH2-206ENST00000543555 PGRMC1O00264 195 aaKnown RBP15.06■□□□□ 0
MSH2-206ENST00000543555 ATP2A1O14983 1001 aa15.06■□□□□ 0
MSH2-206ENST00000543555 BUB1BO60566 1050 aaPredicted RBP15.06■□□□□ 0
MSH2-206ENST00000543555 DKC1O60832 514 aaKnown RBP eCLIP15.06■□□□□ 0
MSH2-206ENST00000543555 STBD1O95210 358 aa15.06■□□□□ 0
MSH2-206ENST00000543555 CARSP49589 748 aaKnown RBP15.06■□□□□ 0
MSH2-206ENST00000543555 NNTQ13423 1086 aa15.06■□□□□ 0
MSH2-206ENST00000543555 TTLL12Q14166 644 aaPredicted RBP15.06■□□□□ 0
MSH2-206ENST00000543555 SNRNP35Q16560 246 aaKnown RBP15.06■□□□□ 0
MSH2-206ENST00000543555 CBWD2Q8IUF1 395 aa15.06■□□□□ 0
MSH2-206ENST00000543555 SPIRE2Q8WWL2 714 aa15.06■□□□□ 0
MSH2-206ENST00000543555 BSNDQ8WZ55 320 aa15.06■□□□□ 0
MSH2-206ENST00000543555 KIFAP3Q92845 792 aa15.06■□□□□ 0
MSH2-206ENST00000543555 CALR3Q96L12 384 aaKnown RBP15.06■□□□□ 0
MSH2-206ENST00000543555 TEX13BQ9BXU2 312 aa15.06■□□□□ 0
MSH2-206ENST00000543555 FAM204AQ9H8W3 233 aa15.06■□□□□ 0
MSH2-206ENST00000543555 KMT5AQ9NQR1 393 aa15.06■□□□□ 0
MSH2-206ENST00000543555 CYP39A1Q9NYL5 469 aa15.06■□□□□ 0
MSH2-206ENST00000543555 CCDC66A2RUB6 948 aa15.05■□□□□ 0
MSH2-206ENST00000543555 RAD51CO43502 376 aa15.05■□□□□ 0
MSH2-206ENST00000543555 CNGA1P29973 690 aa15.05■□□□□ 0
MSH2-206ENST00000543555 PPATQ06203 517 aa15.05■□□□□ 0
MSH2-206ENST00000543555 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ 0
MSH2-206ENST00000543555 KLHL7Q8IXQ5 586 aa15.05■□□□□ 0
MSH2-206ENST00000543555 SLC20A1Q8WUM9 679 aa15.05■□□□□ 0
MSH2-206ENST00000543555 ARHGEF26Q96DR7 871 aa15.05■□□□□ 0
MSH2-206ENST00000543555 KLRG1Q96E93 195 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms