RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SRLQ86TD4 932 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 FNDC3AQ9Y2H6 1198 aaKnown RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 NPHP4O75161 1426 aaPredicted RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 PI4K2BG5E9Z4 385 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 KITP10721 976 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 CYP2C19P33261 490 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 GUCY1A3Q02108 690 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 POTEGQ6S5H5 508 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 TTC39CQ8N584 583 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 EXT2Q93063 718 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 CCSER1Q9C0I3 900 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 USP42Q9H9J4 1324 aaKnown RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 SSU72P8A0A1W2PR75 194 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 PDXKO00764 312 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 QARSP47897 775 aaKnown RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 RAD23BP54727 409 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 TAP1Q03518 808 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 PDIA5Q14554 519 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 LRRC14Q15048 493 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 GTSE1Q9NYZ3 720 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 ARHGAP10A1A4S6 786 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 FCER1AP12319 257 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 GPC3P51654 580 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 NCAPHQ15003 741 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 CDKL3Q8IVW4 592 aaPredicted RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 ING2Q9H160 280 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 TOPORSQ9NS56 1045 aaPredicted RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 PLA2R1Q13018 1463 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SLC1A1P43005 524 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 ROR1Q01973 937 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 STXBP2Q15833 593 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 GPR162Q16538 588 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 ZNF746Q6NUN9 644 aaPredicted RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 ARHGAP27Q6ZUM4 889 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 ARL2BPQ9Y2Y0 163 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 ABCA8O94911 1581 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SLC16A3O15427 465 aaKnown RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 RAD17O75943 681 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SRGNP10124 158 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 GRAMD4Q6IC98 578 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 CNPY4Q8N129 248 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 MAGEB5Q9BZ81 275 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 KIF9Q9HAQ2 790 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SLC9A2Q9UBY0 812 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 LRFN2Q9ULH4 789 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 CYP27B1O15528 508 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 DIAPH2O60879 1101 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 PSMC1P62191 440 aaKnown RBP13.93□□□□□ -0.18
TNC-212ENST00000542877 SLC18A3Q16572 532 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 Q3C1V9 767 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 CATSPER4Q7RTX7 472 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 ICA1LQ8NDH6 482 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 FSD1LQ9BXM9 530 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 SNX5Q9Y5X3 404 aa13.93□□□□□ -0.18
TNC-212ENST00000542877 MARK3P27448 753 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 CRKP46108 304 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 KRT17Q04695 432 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 ATL2Q8NHH9 583 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 TTC8Q8TAM2 541 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 ANKRD7Q92527 254 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 NCLNQ969V3 563 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 OSBPL1AQ9BXW6 950 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 WWP1Q9H0M0 922 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 CFAP69A5D8W1 941 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 RTN2O75298 545 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 ZNF189O75820 626 aaPredicted RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 PHKA2P46019 1235 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 KIAA1755Q5JYT7 1200 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 MTRQ99707 1265 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 SCHIP1Q9P0W5 487 aaPredicted RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 WARS2Q9UGM6 360 aaKnown RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 SNX2O60749 519 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 E2F6O75461 281 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 AP3M2P53677 418 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 BCAR1P56945 870 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 EFTUD2Q15029 972 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNC-212ENST00000542877 TMEM259Q4ZIN3 620 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 STOX1Q6ZVD7 989 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 NDUFAF2Q8N183 169 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 STAMBPL1Q96FJ0 436 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms