RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 CPPED1Q9BRF8 314 aaPredicted RBP3.52□□□□□ -1.85
KNTC1-213ENST00000542727 KCNH6Q9H252 994 aa3.52□□□□□ -1.85
KNTC1-213ENST00000542727 RIOX1Q9H6W3 641 aa3.52□□□□□ -1.85
KNTC1-213ENST00000542727 CYP4F11Q9HBI6 524 aa3.52□□□□□ -1.85
KNTC1-213ENST00000542727 PTGFRNQ9P2B2 879 aa3.52□□□□□ -1.85
KNTC1-213ENST00000542727 MAGEC2Q9UBF1 373 aaPredicted RBP3.52□□□□□ -1.85
KNTC1-213ENST00000542727 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.52□□□□□ -1.85
KNTC1-213ENST00000542727 ZKSCAN5Q9Y2L8 839 aa3.52□□□□□ -1.85
KNTC1-213ENST00000542727 PCDHB6Q9Y5E3 794 aa3.52□□□□□ -1.85
KNTC1-213ENST00000542727 A0A0A6YYK5 440 aaPredicted RBP3.51□□□□□ -1.85
KNTC1-213ENST00000542727 GAS7O60861 476 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 DNAJC6O75061 913 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 APOL3O95236 402 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 JMJD7P0C870 316 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 HK1P19367 917 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 SLC9A1P19634 815 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 NR4A1P22736 598 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 AVPR1BP47901 424 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 NRG3P56975 720 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 BLOC1S1P78537 153 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 LRRC32Q14392 662 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 GPR158Q5T848 1215 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 HECTD2Q5U5R9 776 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 STRIP1Q5VSL9 837 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 SYCE2Q6PIF2 218 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 VRK3Q8IV63 474 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 EFHBQ8N7U6 833 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 OR52N2Q8NGI0 321 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 UBXN4Q92575 508 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 ZNF764Q96H86 408 aaPredicted RBP3.51□□□□□ -1.85
KNTC1-213ENST00000542727 CLUHP3Q96NS8 147 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 SOX7Q9BT81 388 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 MYL10Q9BUA6 226 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 EPC1Q9H2F5 836 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 TOMM22Q9NS69 142 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 ZNHIT2Q9UHR6 403 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 EIF2B4Q9UI10 523 aaKnown RBP3.51□□□□□ -1.85
KNTC1-213ENST00000542727 HDAC5Q9UQL6 1122 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 TNFRSF18Q9Y5U5 241 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 COL4A3Q01955 1670 aa3.51□□□□□ -1.85
KNTC1-213ENST00000542727 MYPNQ86TC9 1320 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 RNASET2O00584 256 aaKnown RBP3.5□□□□□ -1.85
KNTC1-213ENST00000542727 XPAP23025 273 aaPredicted RBP3.5□□□□□ -1.85
KNTC1-213ENST00000542727 CD38P28907 300 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 GZMKP49863 264 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 USP14P54578 494 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 MRPS21P82921 87 aaKnown RBP3.5□□□□□ -1.85
KNTC1-213ENST00000542727 DUSP2Q05923 314 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 MRPL49Q13405 166 aaKnown RBP3.5□□□□□ -1.85
KNTC1-213ENST00000542727 ZNF460Q14592 562 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 BMS1Q14692 1282 aaKnown RBP3.5□□□□□ -1.85
KNTC1-213ENST00000542727 CFAP100Q494V2 611 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 CREB3L3Q68CJ9 461 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 CDCA2Q69YH5 1023 aaPredicted RBP3.5□□□□□ -1.85
KNTC1-213ENST00000542727 ESPNLQ6ZVH7 1005 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 PLXDC1Q8IUK5 500 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 LILRB2Q8N423 598 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 SUPT20HQ8NEM7 779 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 OR5M3Q8NGP4 307 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 RSAD2Q8WXG1 361 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 FERMT2Q96AC1 680 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 COQ10AQ96MF6 247 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 NDC1Q9BTX1 674 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 WNT8AQ9H1J5 351 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 OSBPL2Q9H1P3 480 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 POFUT1Q9H488 388 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 ZSWIM4Q9H7M6 989 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 OXSMQ9NWU1 459 aa3.5□□□□□ -1.85
KNTC1-213ENST00000542727 TMEM200CA6NKL6 621 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 PRR5-ARHGAP8B1AHC4 643 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 STC2O76061 302 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 SEC24DO94855 1032 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-213ENST00000542727 SPATA31D3P0C874 917 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 HSP90B1P14625 803 aaKnown RBP3.49□□□□□ -1.85
KNTC1-213ENST00000542727 MGAT1P26572 445 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 BMPR1AP36894 532 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 OCRLQ01968 901 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 MEF2AQ02078 507 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-213ENST00000542727 DDB1Q16531 1140 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 CCDC144BQ3MJ40 725 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 LRCH2Q5VUJ6 765 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 DRICH1Q6PGQ1 229 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-213ENST00000542727 LMBR1LQ6UX01 489 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 SPATA31D4Q6ZUB0 917 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 TAS1R1Q7RTX1 841 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 GDF7Q7Z4P5 450 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 CXorf67Q86X51 503 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-213ENST00000542727 ARHGEF19Q8IW93 802 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 PIK3C3Q8NEB9 887 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 RTF1Q92541 710 aaKnown RBP3.49□□□□□ -1.85
KNTC1-213ENST00000542727 NELL1Q92832 810 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 ZMAT4Q9H898 229 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 IFT57Q9NWB7 429 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 ING3Q9NXR8 418 aa3.49□□□□□ -1.85
KNTC1-213ENST00000542727 CENPVL1A0A0U1RR11 272 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 AHRRA9YTQ3 701 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 B5MCH6 92 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 PCDH8O95206 1070 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 LY86O95711 162 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 F2P00734 622 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms