RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 TTC38Q5R3I4 469 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 NOTUMQ6P988 496 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 MRPL10Q7Z7H8 261 aaKnown RBP22.49■■□□□ 1.19
DDB1-220ENST00000542337 NOSTRINQ8IVI9 506 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 SMRP1Q8NCR6 262 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 KIF2CQ99661 725 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 RSAD1Q9HA92 442 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 TBC1D13Q9NVG8 400 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 NT5C1B-RDH14C9J2C7 533 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 GPR37L1O60883 481 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 ARL2P36404 184 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 CATSPER3Q86XQ3 398 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 HACE1Q8IYU2 909 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 MRPL43Q8N983 215 aaKnown RBP22.48■■□□□ 1.19
DDB1-220ENST00000542337 MCPH1Q8NEM0 835 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 KHSRPQ92945 711 aaKnown RBP eCLIP22.48■■□□□ 1.19
DDB1-220ENST00000542337 POLR3CQ9BUI4 534 aaPredicted RBP22.48■■□□□ 1.19
DDB1-220ENST00000542337 GBP3Q9H0R5 595 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 STK39Q9UEW8 545 aa22.48■■□□□ 1.19
DDB1-220ENST00000542337 HIDE1A8MVS5 230 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 DCXO43602 365 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 USO1O60763 962 aaKnown RBP22.47■■□□□ 1.19
DDB1-220ENST00000542337 CXCL14O95715 111 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 GLP2RO95838 553 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 ITGA4P13612 1032 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 NCLP19338 710 aaKnown RBP22.47■■□□□ 1.19
DDB1-220ENST00000542337 GIT2Q14161 759 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 HAUS3Q68CZ6 603 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 TMEM184AQ6ZMB5 413 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 IFNLR1Q8IU57 520 aaPredicted RBP22.47■■□□□ 1.19
DDB1-220ENST00000542337 LRFN3Q9BTN0 628 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 TRIM6Q9C030 488 aaPredicted RBP22.47■■□□□ 1.19
DDB1-220ENST00000542337 POLR3FQ9H1D9 316 aaPredicted RBP22.47■■□□□ 1.19
DDB1-220ENST00000542337 NRDE2Q9H7Z3 1164 aa22.47■■□□□ 1.19
DDB1-220ENST00000542337 DBR1Q9UK59 544 aaKnown RBP22.47■■□□□ 1.19
DDB1-220ENST00000542337 A0A087WWV3 80 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 MEIS3P2A8K0S8 358 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 ALDH2P05091 517 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 GALTP07902 379 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 SPATA31C1P0DKV0 1188 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 RPA1P27694 616 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 CAPSQ13938 189 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 LLGL2Q6P1M3 1020 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 AGMOQ6ZNB7 445 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 DDX53Q86TM3 631 aaKnown RBP22.46■■□□□ 1.19
DDB1-220ENST00000542337 VPS52Q8N1B4 723 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 ASAP3Q8TDY4 903 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 CASP10Q92851 521 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 IGSF21Q96ID5 467 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 NFKBIZQ9BYH8 718 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 USP15Q9Y4E8 981 aaPredicted RBP22.46■■□□□ 1.19
DDB1-220ENST00000542337 STK24Q9Y6E0 443 aa22.46■■□□□ 1.19
DDB1-220ENST00000542337 PLXNA4Q9HCM2 1894 aa22.45■■□□□ 1.19
DDB1-220ENST00000542337 ARHGEF35A5YM69 484 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 C2orf71A6NGG8 1288 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 TSPAN1O60635 241 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 MED24O75448 989 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 HOXB8P17481 243 aaPredicted RBP22.45■■□□□ 1.18
DDB1-220ENST00000542337 GLRA2P23416 452 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 UBXN11Q5T124 520 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 MAEAQ7L5Y9 396 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 RAB34Q9BZG1 259 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 CSRNP2Q9H175 543 aa22.45■■□□□ 1.18
DDB1-220ENST00000542337 LRRIQ4A6NIV6 560 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 MUTP22033 750 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 MBTD1Q05BQ5 628 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 TPRNQ4KMQ1 711 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 ANKRD54Q6NXT1 300 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 ZBTB8OSQ8IWT0 167 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 VN1R2Q8NFZ6 395 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 CPB2Q96IY4 423 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 TMEM175Q9BSA9 504 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 FAN1Q9Y2M0 1017 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 IPPQ9Y573 584 aa22.44■■□□□ 1.18
DDB1-220ENST00000542337 ATG2AQ2TAZ0 1938 aa22.43■■□□□ 1.18
DDB1-220ENST00000542337 FAM86C2PA6NEL3 165 aa22.43■■□□□ 1.18
DDB1-220ENST00000542337 NR1I2O75469 434 aa22.43■■□□□ 1.18
DDB1-220ENST00000542337 U2AF2P26368 475 aaKnown RBP eCLIP22.43■■□□□ 1.185e-14■■■■■ 54.8
DDB1-220ENST00000542337 SLC11A1P49279 550 aa22.43■■□□□ 1.18
DDB1-220ENST00000542337 RBM10P98175 930 aaKnown RBP22.43■■□□□ 1.18
DDB1-220ENST00000542337 ZNF280BQ86YH2 543 aa22.43■■□□□ 1.18
DDB1-220ENST00000542337 PHF7Q9BWX1 381 aaPredicted RBP22.43■■□□□ 1.18
DDB1-220ENST00000542337 HCN4Q9Y3Q4 1203 aa22.43■■□□□ 1.18
DDB1-220ENST00000542337 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.42■■□□□ 1.18
DDB1-220ENST00000542337 POMCP01189 267 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 CTSAP10619 480 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 CCT6AP40227 531 aaKnown RBP22.42■■□□□ 1.18
DDB1-220ENST00000542337 FXR2P51116 673 aaKnown RBP eCLIP22.42■■□□□ 1.184e-8■■■□□ 17.1
DDB1-220ENST00000542337 CES5AQ6NT32 575 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 POTEGQ6S5H5 508 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 PADI6Q6TGC4 694 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 SMG8Q8ND04 991 aaKnown RBP22.42■■□□□ 1.18
DDB1-220ENST00000542337 EIF2AQ9BY44 585 aaKnown RBP22.42■■□□□ 1.18
DDB1-220ENST00000542337 ZBP1Q9H171 429 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 C2orf40Q9H1Z8 148 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 PRMT7Q9NVM4 692 aaPredicted RBP22.42■■□□□ 1.18
DDB1-220ENST00000542337 DNAJB4Q9UDY4 337 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 LRWD1Q9UFC0 647 aa22.42■■□□□ 1.18
DDB1-220ENST00000542337 CLASP2O75122 1294 aaKnown RBP22.41■■□□□ 1.18
DDB1-220ENST00000542337 ARF4P18085 180 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms