RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 GGCXP38435 758 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 PTGER2P43116 358 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 TAF11Q15544 211 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 MUM1Q2TAK8 710 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 ANKRD20A2Q5SQ80 823 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 ANKRD20A1Q5TYW2 823 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 ANKRD20A3Q5VUR7 823 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 HIBCHQ6NVY1 386 aaPredicted RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 BRSK2Q8IWQ3 736 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 ZSCAN29Q8IWY8 852 aaPredicted RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 SPERTQ8NA61 448 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 LRRC15Q8TF66 581 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 CASP10Q92851 521 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 COA7Q96BR5 231 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 PARVGQ9HBI0 331 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDH3-203ENST00000542274 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 BARHL2Q9NY43 387 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 SCAF8Q9UPN6 1271 aaKnown RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 ZNF711Q9Y462 761 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 H0Y3Z8 333 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 CES1P23141 567 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 NAPAP54920 295 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 CCDC122Q5T0U0 273 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 TMEM214Q6NUQ4 689 aaKnown RBP11.93□□□□□ -0.5
CDH3-203ENST00000542274 NIM1KQ8IY84 436 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 CCDC110Q8TBZ0 833 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 ZNF473Q8WTR7 871 aaKnown RBP11.93□□□□□ -0.5
CDH3-203ENST00000542274 TCF12Q99081 682 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 B3GNT4Q9C0J1 378 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 FKBP14Q9NWM8 211 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 NFKBIEO00221 500 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 DNAJC8O75937 253 aaPredicted RBP11.93□□□□□ -0.5
CDH3-203ENST00000542274 PIK3CAP42336 1068 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 ZBTB17Q13105 803 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 PDCLQ13371 301 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 IQCEQ6IPM2 695 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 TTBK2Q6IQ55 1244 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
CDH3-203ENST00000542274 C6orf89Q6UWU4 347 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 SH3BP5LQ7L8J4 393 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 PPFIBP2Q8ND30 876 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 DQX1Q8TE96 717 aaKnown RBP11.93□□□□□ -0.5
CDH3-203ENST00000542274 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
CDH3-203ENST00000542274 RFC5P40937 340 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 SCTRP47872 440 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 PEX5P50542 639 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 FKBP1AP62942 108 aaKnown RBP11.92□□□□□ -0.5
CDH3-203ENST00000542274 PDE1BQ01064 536 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 GABPAQ06546 454 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 BBS9Q3SYG4 887 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 MAEAQ7L5Y9 396 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 SESTD1Q86VW0 696 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 SPATA20Q8TB22 786 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 FERMT2Q96AC1 680 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 CEP44Q9C0F1 390 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 WDR46O15213 610 aaKnown RBP11.92□□□□□ -0.5
CDH3-203ENST00000542274 TSPAN1O60635 241 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 OXSR1O95747 527 aaPredicted RBP11.92□□□□□ -0.5
CDH3-203ENST00000542274 GNA14O95837 355 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 RHOXF2BP0C7M4 288 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
CDH3-203ENST00000542274 ETFBP38117 255 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 LETM2Q2VYF4 491 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 FOXB2Q5VYV0 432 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 TMEM154Q6P9G4 183 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 RHOXF2Q9BQY4 288 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 OSBPL7Q9BZF2 842 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 MTMR4Q9NYA4 1195 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 EURLQ9NYK6 297 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 SERPINB13Q9UIV8 391 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
CDH3-203ENST00000542274 LOC105371267A0A1B0GV96 52 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 ZNF254O75437 659 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 LCA5LO95447 670 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 PDHA1P08559 390 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 SKIP12755 728 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 SHMT1P34896 483 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 CHKAP35790 457 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 POLD2P49005 469 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 CXCL9Q07325 125 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 KIF5AQ12840 1032 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 TNIP1Q15025 636 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.91□□□□□ -0.5
CDH3-203ENST00000542274 NPLOC4Q8TAT6 608 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
CDH3-203ENST00000542274 GBA3Q9H227 469 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms