RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SDK1Q7Z5N4 2213 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 ZNF213O14771 459 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 GAS2O43903 313 aaKnown RBP11.08□□□□□ -0.64
CHFR-220ENST00000541817 OFD1O75665 1012 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 URODP06132 367 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 ADH1AP07327 375 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 PCP11498 1178 aaKnown RBP11.08□□□□□ -0.64
CHFR-220ENST00000541817 RPL17P18621 184 aaKnown RBP11.08□□□□□ -0.64
CHFR-220ENST00000541817 ZNF252P-AS1Q0IIN9 211 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
CHFR-220ENST00000541817 MCMDC2Q4G0Z9 681 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 RSPO2Q6UXX9 243 aaPredicted RBP11.08□□□□□ -0.64
CHFR-220ENST00000541817 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 ZNF852Q6ZMS4 543 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 CEP68Q76N32 757 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 CCDC60Q8IWA6 550 aaPredicted RBP11.08□□□□□ -0.64
CHFR-220ENST00000541817 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 FGF13Q92913 245 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 PHF20Q9BVI0 1012 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 LMAN1LQ9HAT1 526 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 FAN1Q9Y2M0 1017 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 LOC400499M0QZD8 3231 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 TTC41PQ6P2S7 1318 aa11.08□□□□□ -0.64
CHFR-220ENST00000541817 LAMA1P25391 3075 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 F8W810 466 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 NRP1O14786 923 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 TGM5O43548 720 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 EIF4BP23588 611 aaKnown RBP11.07□□□□□ -0.64
CHFR-220ENST00000541817 PHKA2P46019 1235 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 PFKPQ01813 784 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 GAS6Q14393 721 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 BECN1Q14457 450 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 ZNF484Q5JVG2 852 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 CKAP2LQ8IYA6 745 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 ING5Q8WYH8 240 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
CHFR-220ENST00000541817 NELL2Q99435 816 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 UBAC1Q9BSL1 405 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 CHRDQ9H2X0 955 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 KCNH7Q9NS40 1196 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 PRG3Q9Y2Y8 225 aaPredicted RBP11.07□□□□□ -0.64
CHFR-220ENST00000541817 TICRRQ7Z2Z1 1910 aa11.07□□□□□ -0.64
CHFR-220ENST00000541817 ASH1LQ9NR48 2969 aaKnown RBP11.07□□□□□ -0.64
CHFR-220ENST00000541817 TMEM8BA6NDV4 472 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 CCNE2O96020 404 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 SOD2P04179 222 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 DEKP35659 375 aaKnown RBP11.06□□□□□ -0.64
CHFR-220ENST00000541817 TRAF1Q13077 416 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 ITGB3BPQ13352 177 aaPredicted RBP11.06□□□□□ -0.64
CHFR-220ENST00000541817 GRM4Q14833 912 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 SEC23AQ15436 765 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 TCEAL6Q6IPX3 200 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 SWSAP1Q6NVH7 229 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 EFCAB12Q6NXP0 572 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 GLB1LQ6UWU2 654 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 FAM43BQ6ZT52 329 aaPredicted RBP11.06□□□□□ -0.64
CHFR-220ENST00000541817 MTSS1LQ765P7 747 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 PDZD3Q86UT5 571 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 ZNF687Q8N1G0 1237 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 TCEAL3Q969E4 200 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 HERC2P3Q9BVR0 1158 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 RHOBTB2Q9BYZ6 727 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 C2orf42Q9NWW7 574 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 POLIQ9UNA4 740 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 BPTFQ12830 3046 aa11.06□□□□□ -0.64
CHFR-220ENST00000541817 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
CHFR-220ENST00000541817 COL1A2P08123 1366 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 CCL16O15467 120 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 ATG7O95352 703 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 POMCP01189 267 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 ALDH2P05091 517 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 ZNF806P0C7X5 589 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 CXCL12P48061 93 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 GLUD2P49448 558 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 CCR3P51677 355 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 GRM2Q14416 872 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 RNF43Q68DV7 783 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
CHFR-220ENST00000541817 ELMSAN1Q6PJG2 1045 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 POTEHQ6S545 545 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 CYB5R4Q7L1T6 521 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 PGBD1Q96JS3 809 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 FAM193BQ96PV7 902 aaPredicted RBP11.05□□□□□ -0.64
CHFR-220ENST00000541817 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 ZNF302Q9NR11 478 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 HCFC1R1Q9NWW0 138 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 MARCH5Q9NX47 278 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 DPP7Q9UHL4 492 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 MRPS17Q9Y2R5 130 aaKnown RBP11.05□□□□□ -0.64
CHFR-220ENST00000541817 ZMYM6O95789 1325 aa11.05□□□□□ -0.64
CHFR-220ENST00000541817 ITPR1Q14643 2758 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms